Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is yeiH [C]

Identifier: 115351709

GI number: 115351709

Start: 1829925

End: 1831001

Strand: Direct

Name: yeiH [C]

Synonym: Bamb_1657

Alternate gene names: 115351709

Gene position: 1829925-1831001 (Clockwise)

Preceding gene: 115351700

Following gene: 115351710

Centisome position: 51.45

GC content: 69.92

Gene sequence:

>1077_bases
ATGTCCACTGCTCCTGCCCCCCATCTCAGCCACGCCGCGCCGTCGATGCGCGGCCAGTTGAACGGCGTGCTGTTCGTCGC
GCTGTTCGCCGCCGCCGTCACGAGCCTGTCGGAACTGCCGGCGATCGCCGGGCTCGGCCTGTCGCCACTGATCGTCGGGA
TCGTCGCCGGCGCGCTGTACGGCAACGCACTGCGCGACGGCATGCCCGCGAGCTGGGCGGCCGGCGTCAACTTTTCCGCG
CGCAAGCTGCTGCGCATCGCGGTCGCGTTCTTCGGCTTGCGCGTGAGCCTGCAGGAAATCGCGCAGGTCGGCCTACCCGG
CCTGACGGTATCGGTGCTGGTCGTCGTCAGCACGCTCGTGATCGGCACCTGGGTCGGCATGAAGGTGATGAAGCTCGATC
GCGACGCGGCGCTGCTGACCGCCGCCGGCAGCGCGATCTGCGGCGCGGCCGCCGTGCTCGCGTTCGAGTCGACGCTGCAG
TCGAAGCCGCACCAGAGCGCGATGGCCGTGGGCAGCGTGGTGCTGTTCGGCACGCTGTCGATGTTCCTCTACCCGCTCGC
GTATCACGCCGGCCTGCTCGGCCTCGACCCGACCGGCCTCGGCCTGTTCTTCGGCGGCACGATCCACGAGGTTGCGCAGG
TGGTCGGCGCGGCGAGCGACATCAGCCCGCAGGTCACGCACGTCGCGACCATCGTGAAGATGACCCGCGTGATGCTGCTG
GTGCCGGTGCTGCTCACGCTCGGCTGGTGGCTCGCCCGCTCCGCCCGCTCGGCCAGCGCGAGCGCCGACGGCGCGCAAGG
CAAACGCAAGGTGGCGGTGCCGTGGTTCGCGCTCGGTTTCCTCGGCTTCGTGATCGTCAATTCGCTGAACGTGCTGCCCG
CCGATGTCACGCATACGCTGAACCTGCTCGACACCTTCGCGCTGACGATGGCGATGACCGCGCTCGGCATCGAGACCCGC
GTGTCGCAGATCCGCGAAGCCGGCCCCCGCGCCCTGACCACCGGCCTGATCCTGTACGTCTGGCTGATCGCCGGCGGCTA
CGGGATCACCTGGGCCGTGCAGCGCTGCCTTGGCTGA

Upstream 100 bases:

>100_bases
CGGCTTTCCGGATAGTTTACGTCACAAATCACAATTTTTCATATCGATATATCCAAATTAGGATTAAGCCATCGCAACCT
GCTTCGCCACGGTGCCCTTC

Downstream 100 bases:

>100_bases
GCCGCGCATCCACGCCGCGACACGCGCCGCGCCCGACGGGAAGGTCCCGCGGGCGCGGCGCAGTGCTATGCTTCGCGTCG
TTTTCCTTCGTCCCCTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSTAPAPHLSHAAPSMRGQLNGVLFVALFAAAVTSLSELPAIAGLGLSPLIVGIVAGALYGNALRDGMPASWAAGVNFSA
RKLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLVIGTWVGMKVMKLDRDAALLTAAGSAICGAAAVLAFESTLQ
SKPHQSAMAVGSVVLFGTLSMFLYPLAYHAGLLGLDPTGLGLFFGGTIHEVAQVVGAASDISPQVTHVATIVKMTRVMLL
VPVLLTLGWWLARSARSASASADGAQGKRKVAVPWFALGFLGFVIVNSLNVLPADVTHTLNLLDTFALTMAMTALGIETR
VSQIREAGPRALTTGLILYVWLIAGGYGITWAVQRCLG

Sequences:

>Translated_358_residues
MSTAPAPHLSHAAPSMRGQLNGVLFVALFAAAVTSLSELPAIAGLGLSPLIVGIVAGALYGNALRDGMPASWAAGVNFSA
RKLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLVIGTWVGMKVMKLDRDAALLTAAGSAICGAAAVLAFESTLQ
SKPHQSAMAVGSVVLFGTLSMFLYPLAYHAGLLGLDPTGLGLFFGGTIHEVAQVVGAASDISPQVTHVATIVKMTRVMLL
VPVLLTLGWWLARSARSASASADGAQGKRKVAVPWFALGFLGFVIVNSLNVLPADVTHTLNLLDTFALTMAMTALGIETR
VSQIREAGPRALTTGLILYVWLIAGGYGITWAVQRCLG
>Mature_357_residues
STAPAPHLSHAAPSMRGQLNGVLFVALFAAAVTSLSELPAIAGLGLSPLIVGIVAGALYGNALRDGMPASWAAGVNFSAR
KLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLVIGTWVGMKVMKLDRDAALLTAAGSAICGAAAVLAFESTLQS
KPHQSAMAVGSVVLFGTLSMFLYPLAYHAGLLGLDPTGLGLFFGGTIHEVAQVVGAASDISPQVTHVATIVKMTRVMLLV
PVLLTLGWWLARSARSASASADGAQGKRKVAVPWFALGFLGFVIVNSLNVLPADVTHTLNLLDTFALTMAMTALGIETRV
SQIREAGPRALTTGLILYVWLIAGGYGITWAVQRCLG

Specific function: Unknown

COG id: COG2855

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0324 family [H]

Homologues:

Organism=Escherichia coli, GI1788482, Length=320, Percent_Identity=40.3125, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004630
- InterPro:   IPR018383 [H]

Pfam domain/function: PF03601 Cons_hypoth698 [H]

EC number: NA

Molecular weight: Translated: 37064; Mature: 36933

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAPAPHLSHAAPSMRGQLNGVLFVALFAAAVTSLSELPAIAGLGLSPLIVGIVAGALY
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GNALRDGMPASWAAGVNFSARKLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLV
HHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IGTWVGMKVMKLDRDAALLTAAGSAICGAAAVLAFESTLQSKPHQSAMAVGSVVLFGTLS
HHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MFLYPLAYHAGLLGLDPTGLGLFFGGTIHEVAQVVGAASDISPQVTHVATIVKMTRVMLL
HHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VPVLLTLGWWLARSARSASASADGAQGKRKVAVPWFALGFLGFVIVNSLNVLPADVTHTL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHH
NLLDTFALTMAMTALGIETRVSQIREAGPRALTTGLILYVWLIAGGYGITWAVQRCLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
STAPAPHLSHAAPSMRGQLNGVLFVALFAAAVTSLSELPAIAGLGLSPLIVGIVAGALY
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GNALRDGMPASWAAGVNFSARKLLRIAVAFFGLRVSLQEIAQVGLPGLTVSVLVVVSTLV
HHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IGTWVGMKVMKLDRDAALLTAAGSAICGAAAVLAFESTLQSKPHQSAMAVGSVVLFGTLS
HHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MFLYPLAYHAGLLGLDPTGLGLFFGGTIHEVAQVVGAASDISPQVTHVATIVKMTRVMLL
HHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VPVLLTLGWWLARSARSASASADGAQGKRKVAVPWFALGFLGFVIVNSLNVLPADVTHTL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHH
NLLDTFALTMAMTALGIETRVSQIREAGPRALTTGLILYVWLIAGGYGITWAVQRCLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]