| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is 115351700
Identifier: 115351700
GI number: 115351700
Start: 1821440
End: 1821871
Strand: Direct
Name: 115351700
Synonym: Bamb_1648
Alternate gene names: NA
Gene position: 1821440-1821871 (Clockwise)
Preceding gene: 115351699
Following gene: 115351709
Centisome position: 51.21
GC content: 70.14
Gene sequence:
>432_bases ATGCTCGAACTCAAGCACATCGATCTGCGTACCGACCCGCAGGCCCGTCACGTCGTCAAGGACGAAACCGTCACGGTCGC GTTCGCGGCTGCCGACGGCGAACTGATGAGCCTCGAAGGCCCGAACCGCTATGTCGCGGGCGACGCACTGATCACCGGCT CGACCGGCGACCGCTGGGTCGTGTCGCGCGCACGCTTCGACGCGAAGTACCTGCCCGCCGACCCGGCGCTCGCGCACGGC ACGCCGGGCGCGTACCGCAATCGGCCGGCCGTCGTGCTCGCACGCCGCATGGACGAGCCGTTCACGATCGCCCGCTCGGA AAACGGCGACACGCTGCGCGGCGTCGCCGGCGACTGGGTGATGCAGTATGCGCCCGGCGACTACGGCGTCGTGCAGGCGC AGCGTTTCGCGCAGGTCTACCGCGACGCGTGA
Upstream 100 bases:
>100_bases GGACGGGCGAACGGCGTCGCGCATCCCACGGGAATTCGGCGCGTCACACGGCGCGCCGAATTCGGGATAAGCTCCCGGCT TTTCCCGCACTCCCCCCGCC
Downstream 100 bases:
>100_bases CCCACCGCAGGCGCGCGAGGCATCGCGTGCTGTCGTCGCGCGTCATGCCTGCGTTGCCACAGCGGCGCTCCGCCGGCATC GCGCCGGCGCGCGCTCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MLELKHIDLRTDPQARHVVKDETVTVAFAAADGELMSLEGPNRYVAGDALITGSTGDRWVVSRARFDAKYLPADPALAHG TPGAYRNRPAVVLARRMDEPFTIARSENGDTLRGVAGDWVMQYAPGDYGVVQAQRFAQVYRDA
Sequences:
>Translated_143_residues MLELKHIDLRTDPQARHVVKDETVTVAFAAADGELMSLEGPNRYVAGDALITGSTGDRWVVSRARFDAKYLPADPALAHG TPGAYRNRPAVVLARRMDEPFTIARSENGDTLRGVAGDWVMQYAPGDYGVVQAQRFAQVYRDA >Mature_143_residues MLELKHIDLRTDPQARHVVKDETVTVAFAAADGELMSLEGPNRYVAGDALITGSTGDRWVVSRARFDAKYLPADPALAHG TPGAYRNRPAVVLARRMDEPFTIARSENGDTLRGVAGDWVMQYAPGDYGVVQAQRFAQVYRDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15690; Mature: 15690
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELKHIDLRTDPQARHVVKDETVTVAFAAADGELMSLEGPNRYVAGDALITGSTGDRWV CCEEEECCCCCCCCCCEEECCCEEEEEEEECCCEEEEECCCCEEEECCEEEECCCCCEEE VSRARFDAKYLPADPALAHGTPGAYRNRPAVVLARRMDEPFTIARSENGDTLRGVAGDWV EEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCEE MQYAPGDYGVVQAQRFAQVYRDA EEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLELKHIDLRTDPQARHVVKDETVTVAFAAADGELMSLEGPNRYVAGDALITGSTGDRWV CCEEEECCCCCCCCCCEEECCCEEEEEEEECCCEEEEECCCCEEEECCEEEECCCCCEEE VSRARFDAKYLPADPALAHGTPGAYRNRPAVVLARRMDEPFTIARSENGDTLRGVAGDWV EEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCEE MQYAPGDYGVVQAQRFAQVYRDA EEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA