| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800125
Identifier: 114800125
GI number: 114800125
Start: 2140812
End: 2141975
Strand: Reverse
Name: 114800125
Synonym: HNE_2068
Alternate gene names: NA
Gene position: 2141975-2140812 (Counterclockwise)
Preceding gene: 114797334
Following gene: 114799236
Centisome position: 57.81
GC content: 64.95
Gene sequence:
>1164_bases ATGAGCGTCCAGAGCCTCCGCCCTCAACTGACCCAGCAGGACATCCACCGGCTGATGAAAGGCGAGTCGCCCGAGCAGCG CGCATCGGTGGCCCACAGGCTGTGCCGCCGCATCGGTCTGGATGTCCTCAGCGACAGCGAGAAGGGCTTCGCTCGGGAGA TCATCACGATCCTGGCGAATGACGCGGCAGACCTTGTCCGCCGCACGCTGGCCGTCACGCTCCGGTCCTCGCCCATCATC CCGCGTGAGATCGCGCTCAAGCTCGCCCGCGACATCGAAGCCGTGGCGATCCCCATCCTGGAAGAGTCCCCCGTCTTCAC CGAAGAAGACCTCGTCGAACTCGTCCTCTCCGTCACCGCTGCCAAGCAGGCCGCCATCGCCGGCCGCGAAGCGCTGTCGA TCACCGTTGGTGAAGTCATCTCCGAACACGGCGCGGTCGAAGCCGTGCGCGCGCTGGCAGAAAACCAGTCCGCCGAATGG AGCGACAAGGCTTACGGCGACGCGCTCTCCCGTTTCGGCGCAGACGAAATCGTCCAGGCCGGCCTCATCCGGCGCGATTT CATCCCCGTCCACATCGCCGAGAAGATGGTCTCTCTCGTCTCCGGCCAGCTGTTCGACATGCTGGTCAACCGCCATGAAC TGCCCGCCCAGCTCGCGATCGACCTCGCCGCCAGCGCCCGCGAGCGCGCTACGATCGACCTGGTCGAGCAGGCGGGCCGC TCCCACGATCTGCCCCGCTTTGTCTCCCAGCTCAACCTGAATGGCCGCCTCACCCACTCCCTGATGATGCGCGCGCTATG CTGCGGCCAGATGCCGTTTGTCGAGCATGCCCTGGCAGAACTTTCCGGCGTTGCCCACCAGCGCGTGTGGCTAATGATCC ACGACGCAGGCCCGCTCGGCCTGCAAGCGGTGTTCGATCATGCCGGCCTGCCGCGCAAGATGCTGCCGGCCTTCAAGGCG GCGGTGAATGTCTATCATGAGATTGAGCATGACGGCGGCCCGAACGACCGCGCCCGCTTCCGTGCCCGGATGATCGAACG CGTCCTCACCCAGTTCCAGGCCATCCCCAAGGACGACCTCGACTATCTGCTCGACAAGCTCGATTTCTACTCCGAAATGG CTGCCCGCGAAGAGGCGAGCAATAGCGGTTTCGACGCTGCTTAA
Upstream 100 bases:
>100_bases GTTTTGGTGGGGTTCTTTCCATCCCGTCATTTTGGTAAATTCCTGTTAACCGGCTTCGCAGAGGTTGCCGTAGTTATTCT GACGGGGAACCCACCTACCA
Downstream 100 bases:
>100_bases GCGTCAGTGCGCGGAGCAATGGCGCCCGCAACACCGGTCTCTTCCAGAAACTCGCCATCGCGCCAGTTGGCATTGTCTGC CACCACGAGGATGCCGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILANDAADLVRRTLAVTLRSSPII PREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTAAKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEW SDKAYGDALSRFGADEIVQAGLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGR SHDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLGLQAVFDHAGLPRKMLPAFKA AVNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDLDYLLDKLDFYSEMAAREEASNSGFDAA
Sequences:
>Translated_387_residues MSVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILANDAADLVRRTLAVTLRSSPII PREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTAAKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEW SDKAYGDALSRFGADEIVQAGLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGR SHDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLGLQAVFDHAGLPRKMLPAFKA AVNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDLDYLLDKLDFYSEMAAREEASNSGFDAA >Mature_386_residues SVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILANDAADLVRRTLAVTLRSSPIIP REIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTAAKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEWS DKAYGDALSRFGADEIVQAGLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGRS HDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLGLQAVFDHAGLPRKMLPAFKAA VNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDLDYLLDKLDFYSEMAAREEASNSGFDAA
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42679; Mature: 42548
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILAN CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHC DAADLVRRTLAVTLRSSPIIPREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTA CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHH AKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEWSDKAYGDALSRFGADEIVQA HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH GLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SHDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLG CCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHH LQAVFDHAGLPRKMLPAFKAAVNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH DYLLDKLDFYSEMAAREEASNSGFDAA HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SVQSLRPQLTQQDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILAN CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHC DAADLVRRTLAVTLRSSPIIPREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTA CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHH AKQAAIAGREALSITVGEVISEHGAVEAVRALAENQSAEWSDKAYGDALSRFGADEIVQA HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH GLIRRDFIPVHIAEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SHDLPRFVSQLNLNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLG CCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHH LQAVFDHAGLPRKMLPAFKAAVNVYHEIEHDGGPNDRARFRARMIERVLTQFQAIPKDDL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH DYLLDKLDFYSEMAAREEASNSGFDAA HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA