| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
Click here to switch to the map view.
The map label for this gene is metZ [H]
Identifier: 114331157
GI number: 114331157
Start: 1199131
End: 1200306
Strand: Direct
Name: metZ [H]
Synonym: Neut_1159
Alternate gene names: 114331157
Gene position: 1199131-1200306 (Clockwise)
Preceding gene: 114331156
Following gene: 114331158
Centisome position: 45.06
GC content: 51.19
Gene sequence:
>1176_bases ATGACAAATGAATTAGATCTCCAAACGCTGGCTATTCATACCGGCGTCCATCGCAGTCAGTTTAACGAACATTCAGAATC ACTCTATCTGACTTCAAGTTTTGTGTTTGACAGTGCAGCCCAGGCTGCTGCACGGTTCTCAGGGCAAGAACCCGGTAATA TCTATTCGCGCTTTACTAACCCGACAGTAACTGCCATGCAGGAACGCCTAGCTGTGCTGGAAGGGGCGGAAGCCTGTATC GCAACTGCTACTGGTATGGCAGCAATTACGACCTGCGTCATGGGACTACTTTCAGCTGGTGATCATATCGTTGCCTCACG CAGCCTGTTTGGATCTACTGTTGGCTTGTTCAACAATATCCTCAGCCGTTTCAATATCGAAACTACCTTTGTTTCTGCAA CCGATCCGAGTGAATGGCAGGCAGCAGCCAAACCAAACACCAAACTGTTTTTTATGGAAACTCCCTCCAATCCACTCACG GAAATCTCCGATATCGCTGCATTGGCAGACATTGCCAAACGGATTGGGGTGTGGCTAGCGGTTGACAACAGTTTTTGTAC CCCGGTTGTGCAACAACCACTGAAGCTGGGTGCAGATCTGGTCATTCACTCAGCAACAAAATATCTGGACGGGCAGGGCA GAATCCTGGGAGGGGCAATACTGGGTAAACGTGATTTGCTGATGGATAGCGGTATATTCGGTTTCTTGCGAACAGCCGGC CCGGCGCTAAGCGCATTCAATGCCTGGATTATTCTGAAAGGACTTGAAACATTAAGTGTACGGGTAAAAGCACACTCTGA TCATGCACTGGAAGTCGCGCGCTGGCTGGAAGCACATCCTAATGTAGCACGTGTGTTTTACCCGGGTCTGCCGTCTCATC CGCAGCATACACTTGCGATGCGCCAGCAGAAAACCGGTGGCAGCATTGTGTCATTCGAGGCAAAAGGCGGCAAAGAGGCT GCCTGGCGTATTGTAGATGCTGCTCAGCTCATGTCGATTACTGCCAATCTTGGCGATACCAAAAGTACACTGACTCATCC TGCCACTACAACGCATGGGCGTATCAGCCAGGAGGCGCGCGCAGCTGCCGGCGTCAGCGATGGTCTGTTACGTATTGCGG TTGGCCTGGAGTCACCGGAAGACATCAAGGCAGATCTCGCTCGAGGATTGCAGTAG
Upstream 100 bases:
>100_bases ATTGAATCACAGCGTAACAGTCTCGGGTTATCACAAGGGGAGCGCACTACCCAACTTGATTTAACCCTGCTCCCAATGGA TTAACCATATAGAAACGATC
Downstream 100 bases:
>100_bases ACTCGTAATTTATTACAACTGGCACACACTATTCTTCTTGAAACCGGATACGACTAGCAATAAATTTTGCTACCGGTTTT CACTCACTACTACTGTGATA
Product: O-succinylhomoserine sulfhydrylase
Products: Cystathionine; succinate; o-succinyl-L-homoserine; H2O [C]
Alternate protein names: OSH sulfhydrylase [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTNELDLQTLAIHTGVHRSQFNEHSESLYLTSSFVFDSAAQAAARFSGQEPGNIYSRFTNPTVTAMQERLAVLEGAEACI ATATGMAAITTCVMGLLSAGDHIVASRSLFGSTVGLFNNILSRFNIETTFVSATDPSEWQAAAKPNTKLFFMETPSNPLT EISDIAALADIAKRIGVWLAVDNSFCTPVVQQPLKLGADLVIHSATKYLDGQGRILGGAILGKRDLLMDSGIFGFLRTAG PALSAFNAWIILKGLETLSVRVKAHSDHALEVARWLEAHPNVARVFYPGLPSHPQHTLAMRQQKTGGSIVSFEAKGGKEA AWRIVDAAQLMSITANLGDTKSTLTHPATTTHGRISQEARAAAGVSDGLLRIAVGLESPEDIKADLARGLQ
Sequences:
>Translated_391_residues MTNELDLQTLAIHTGVHRSQFNEHSESLYLTSSFVFDSAAQAAARFSGQEPGNIYSRFTNPTVTAMQERLAVLEGAEACI ATATGMAAITTCVMGLLSAGDHIVASRSLFGSTVGLFNNILSRFNIETTFVSATDPSEWQAAAKPNTKLFFMETPSNPLT EISDIAALADIAKRIGVWLAVDNSFCTPVVQQPLKLGADLVIHSATKYLDGQGRILGGAILGKRDLLMDSGIFGFLRTAG PALSAFNAWIILKGLETLSVRVKAHSDHALEVARWLEAHPNVARVFYPGLPSHPQHTLAMRQQKTGGSIVSFEAKGGKEA AWRIVDAAQLMSITANLGDTKSTLTHPATTTHGRISQEARAAAGVSDGLLRIAVGLESPEDIKADLARGLQ >Mature_390_residues TNELDLQTLAIHTGVHRSQFNEHSESLYLTSSFVFDSAAQAAARFSGQEPGNIYSRFTNPTVTAMQERLAVLEGAEACIA TATGMAAITTCVMGLLSAGDHIVASRSLFGSTVGLFNNILSRFNIETTFVSATDPSEWQAAAKPNTKLFFMETPSNPLTE ISDIAALADIAKRIGVWLAVDNSFCTPVVQQPLKLGADLVIHSATKYLDGQGRILGGAILGKRDLLMDSGIFGFLRTAGP ALSAFNAWIILKGLETLSVRVKAHSDHALEVARWLEAHPNVARVFYPGLPSHPQHTLAMRQQKTGGSIVSFEAKGGKEAA WRIVDAAQLMSITANLGDTKSTLTHPATTTHGRISQEARAAAGVSDGLLRIAVGLESPEDIKADLARGLQ
Specific function: Converts O-succinylhomoserine into homocysteine [H]
COG id: COG0626
COG function: function code E; Cystathionine beta-lyases/cystathionine gamma-synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=369, Percent_Identity=35.5013550135501, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI299473759, Length=369, Percent_Identity=31.9783197831978, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI25453487, Length=368, Percent_Identity=30.4347826086957, Blast_Score=167, Evalue=1e-41, Organism=Escherichia coli, GI1790375, Length=384, Percent_Identity=34.8958333333333, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1789383, Length=367, Percent_Identity=27.2479564032698, Blast_Score=142, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17560056, Length=374, Percent_Identity=36.8983957219251, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI17538055, Length=374, Percent_Identity=35.8288770053476, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71980708, Length=369, Percent_Identity=32.520325203252, Blast_Score=216, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6319307, Length=391, Percent_Identity=34.7826086956522, Blast_Score=223, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6323333, Length=439, Percent_Identity=32.5740318906606, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6321254, Length=407, Percent_Identity=29.2383292383292, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6321170, Length=273, Percent_Identity=27.8388278388278, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6321904, Length=406, Percent_Identity=24.384236453202, Blast_Score=93, Evalue=9e-20, Organism=Drosophila melanogaster, GI19922554, Length=388, Percent_Identity=35.0515463917526, Blast_Score=238, Evalue=4e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006234 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: 2.5.1.48 [C]
Molecular weight: Translated: 41736; Mature: 41605
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNELDLQTLAIHTGVHRSQFNEHSESLYLTSSFVFDSAAQAAARFSGQEPGNIYSRFTN CCCCCCCEEEEEECCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCC PTVTAMQERLAVLEGAEACIATATGMAAITTCVMGLLSAGDHIVASRSLFGSTVGLFNNI CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH LSRFNIETTFVSATDPSEWQAAAKPNTKLFFMETPSNPLTEISDIAALADIAKRIGVWLA HHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEE VDNSFCTPVVQQPLKLGADLVIHSATKYLDGQGRILGGAILGKRDLLMDSGIFGFLRTAG ECCCCCCHHHHHHHHCCCHHEEEHHHHHCCCCCCEEEEEEECCHHHHHHCCHHHHHHHCC PALSAFNAWIILKGLETLSVRVKAHSDHALEVARWLEAHPNVARVFYPGLPSHPQHTLAM HHHHHHHHEEEEECCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH RQQKTGGSIVSFEAKGGKEAAWRIVDAAQLMSITANLGDTKSTLTHPATTTHGRISQEAR HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHH AAAGVSDGLLRIAVGLESPEDIKADLARGLQ HHCCCCCCEEEEEECCCCCHHHHHHHHCCCC >Mature Secondary Structure TNELDLQTLAIHTGVHRSQFNEHSESLYLTSSFVFDSAAQAAARFSGQEPGNIYSRFTN CCCCCCEEEEEECCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCC PTVTAMQERLAVLEGAEACIATATGMAAITTCVMGLLSAGDHIVASRSLFGSTVGLFNNI CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH LSRFNIETTFVSATDPSEWQAAAKPNTKLFFMETPSNPLTEISDIAALADIAKRIGVWLA HHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEE VDNSFCTPVVQQPLKLGADLVIHSATKYLDGQGRILGGAILGKRDLLMDSGIFGFLRTAG ECCCCCCHHHHHHHHCCCHHEEEHHHHHCCCCCCEEEEEEECCHHHHHHCCHHHHHHHCC PALSAFNAWIILKGLETLSVRVKAHSDHALEVARWLEAHPNVARVFYPGLPSHPQHTLAM HHHHHHHHEEEEECCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH RQQKTGGSIVSFEAKGGKEAAWRIVDAAQLMSITANLGDTKSTLTHPATTTHGRISQEAR HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHH AAAGVSDGLLRIAVGLESPEDIKADLARGLQ HHCCCCCCEEEEEECCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: pyridoxal 5'-phosphate [C]
Metal ions: NA
Kcat value (1/min): 460 [C]
Specific activity: 10
Km value (mM): 0.33 {O-succinyl-L-homoserine}} [C]
Substrates: O-succinyl-L-homoserine; @CYST01.txt*L-cysteine!; 2-oxobutanoate; succinate; NH3 [C]
Specific reaction: O-succinyl-L-homoserine + @CYST01.txt*L-cysteine! = cystathionine + succinate 2-oxobutanoate + succinate + NH3 = o-succinyl-L-homoserine + H2O [C]
General reaction: Elimination; Gamma-replacement [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704274; 10984043 [H]