Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478288

Identifier: 113478288

GI number: 113478288

Start: 7565852

End: 7566799

Strand: Reverse

Name: 113478288

Synonym: Tery_4962

Alternate gene names: NA

Gene position: 7566799-7565852 (Counterclockwise)

Preceding gene: 113478289

Following gene: 113478287

Centisome position: 97.63

GC content: 38.29

Gene sequence:

>948_bases
ATGCATAATTCGTCTTTGGGTGAGGAAGGTCAAAATTTTCAGTCGGCAAAAGAAGACTACTATAAAAAGTTAGCAGGGTG
GAAACAACAAGATGAGGATGAGAGGGAAAGGCCTAACAGGGAAATAGATGAGAGGCGATCGCTTGATCATATCCGTCAGC
TTGCGTCGTTGAGGTTTAAGCATTTTTATAAGGCAGGGGAAACTCGAGAAAGAAAGTTAGAAACTGAGAATGAGTTGGCA
CGGTTGAAACAAGAATATCCGGAGTTTTTGAGGAAGGGTATTAGGACAACTCTTGGTTATTTTTTTATGCTGTCGTTTTT
TATTGCTGTTTTGGTGATCAATTTTGTTTTAATTAAACAACCTGTGGAATATTTGGCGTCCCAGGCATTTCCTCCAGGGT
CTTTTGCTGTTACTGTTGCGGCTATATTGTTGCCTTTTGTTATTGTTTTGTTTGAGTTGGGGGTTTGTTCTCAGTTGTTT
TCGGCTCAAATGTCTCCTTCTTCTCGTGATGAAGTTATACTTTGGCAAAGGCTGGCTAATACTATTGTTTGGGTAACTCC
GGCGATGTTGCTTGGTACTTCTGTTGCTCTCTATACTGGGGAGGAGTGGCCTCCTGAGTTGTATGAAATAATTTTGTTGT
TGGCGATGGGAATTTTGGCTTATGTGACTGATGCTGGTGTGGTTTATGGTTACGATCGCTATCAAAATGCTTTTGCTTTT
TTTTGGTTTAGAATTAACTATTTACGTCGGCAATATAAGTTGCGCAGATACAAGAGGATTTTTTATCAGGAAAAATATCA
TTTTACTCATGCTTGTAAAAATTATGAGGCGGCGGTTAATTACCATAATCAAAATTTTACAAGTAAGGTTACGTTTGTGC
CTATTAATGTTTATTTTGATGATGTTTATTATGAGCAGTTGTCTATATCTGGAAAACCATCAAGTTGA

Upstream 100 bases:

>100_bases
GTAAGGGGATATTTGAAAATATTGAGCACAAGGCTTTTGAGTCTGTACCTGCTGCTTTTCGGTATTTGGTTACTCAGGTG
AATAAGGGAGAAAATTGAGT

Downstream 100 bases:

>100_bases
GGTTGGTTTTGGTATTATTTTTTGTTTTCTGGTTTTGGTTTTTCTGCCTAAAATTCAGGGTTGATAGGGCAATTTCTCAA
GTGCGGGTGTCTTTTCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MHNSSLGEEGQNFQSAKEDYYKKLAGWKQQDEDERERPNREIDERRSLDHIRQLASLRFKHFYKAGETRERKLETENELA
RLKQEYPEFLRKGIRTTLGYFFMLSFFIAVLVINFVLIKQPVEYLASQAFPPGSFAVTVAAILLPFVIVLFELGVCSQLF
SAQMSPSSRDEVILWQRLANTIVWVTPAMLLGTSVALYTGEEWPPELYEIILLLAMGILAYVTDAGVVYGYDRYQNAFAF
FWFRINYLRRQYKLRRYKRIFYQEKYHFTHACKNYEAAVNYHNQNFTSKVTFVPINVYFDDVYYEQLSISGKPSS

Sequences:

>Translated_315_residues
MHNSSLGEEGQNFQSAKEDYYKKLAGWKQQDEDERERPNREIDERRSLDHIRQLASLRFKHFYKAGETRERKLETENELA
RLKQEYPEFLRKGIRTTLGYFFMLSFFIAVLVINFVLIKQPVEYLASQAFPPGSFAVTVAAILLPFVIVLFELGVCSQLF
SAQMSPSSRDEVILWQRLANTIVWVTPAMLLGTSVALYTGEEWPPELYEIILLLAMGILAYVTDAGVVYGYDRYQNAFAF
FWFRINYLRRQYKLRRYKRIFYQEKYHFTHACKNYEAAVNYHNQNFTSKVTFVPINVYFDDVYYEQLSISGKPSS
>Mature_315_residues
MHNSSLGEEGQNFQSAKEDYYKKLAGWKQQDEDERERPNREIDERRSLDHIRQLASLRFKHFYKAGETRERKLETENELA
RLKQEYPEFLRKGIRTTLGYFFMLSFFIAVLVINFVLIKQPVEYLASQAFPPGSFAVTVAAILLPFVIVLFELGVCSQLF
SAQMSPSSRDEVILWQRLANTIVWVTPAMLLGTSVALYTGEEWPPELYEIILLLAMGILAYVTDAGVVYGYDRYQNAFAF
FWFRINYLRRQYKLRRYKRIFYQEKYHFTHACKNYEAAVNYHNQNFTSKVTFVPINVYFDDVYYEQLSISGKPSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37047; Mature: 37047

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNSSLGEEGQNFQSAKEDYYKKLAGWKQQDEDERERPNREIDERRSLDHIRQLASLRFK
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
HFYKAGETRERKLETENELARLKQEYPEFLRKGIRTTLGYFFMLSFFIAVLVINFVLIKQ
HHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVEYLASQAFPPGSFAVTVAAILLPFVIVLFELGVCSQLFSAQMSPSSRDEVILWQRLAN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
TIVWVTPAMLLGTSVALYTGEEWPPELYEIILLLAMGILAYVTDAGVVYGYDRYQNAFAF
HHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHH
FWFRINYLRRQYKLRRYKRIFYQEKYHFTHACKNYEAAVNYHNQNFTSKVTFVPINVYFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCEEEEEEEEEEEH
DVYYEQLSISGKPSS
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MHNSSLGEEGQNFQSAKEDYYKKLAGWKQQDEDERERPNREIDERRSLDHIRQLASLRFK
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
HFYKAGETRERKLETENELARLKQEYPEFLRKGIRTTLGYFFMLSFFIAVLVINFVLIKQ
HHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVEYLASQAFPPGSFAVTVAAILLPFVIVLFELGVCSQLFSAQMSPSSRDEVILWQRLAN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
TIVWVTPAMLLGTSVALYTGEEWPPELYEIILLLAMGILAYVTDAGVVYGYDRYQNAFAF
HHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHH
FWFRINYLRRQYKLRRYKRIFYQEKYHFTHACKNYEAAVNYHNQNFTSKVTFVPINVYFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCEEEEEEEEEEEH
DVYYEQLSISGKPSS
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA