Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478289

Identifier: 113478289

GI number: 113478289

Start: 7566802

End: 7567707

Strand: Reverse

Name: 113478289

Synonym: Tery_4963

Alternate gene names: NA

Gene position: 7567707-7566802 (Counterclockwise)

Preceding gene: 113478291

Following gene: 113478288

Centisome position: 97.65

GC content: 37.53

Gene sequence:

>906_bases
ATGATTGTAACTATTCTTAAAATATATGGTATTCTGATTATTATATCAACTATTTTATCCATAGCAAGCTGTGCCGGAAA
AGTTGATGGCAAAACTTCTATTAAGACTACATCTCCTATTATATCTGAACCTTTACCAGAAGTCAAAAATGCTTTGCAAA
ACCAAGCCCGGTCAACTCCGGTTAAAGTGGTCATTCTAATAGATAAGACGGTTAGTGCTGACTGGAGTCGCATCGAAGGA
CCAAAAACCCAAGATGTTCAGTCATCTTTGCGGCTATTAAAAATTAATGGTGGGGAGCTAGCAGTAGGAAATTTTTGTGA
TGACAGTAACCGCCCCCTAGAAAGGGTTAGGGTGGAACAACAACCTTTGTTGGAAAAAGTGGTTTTTCATCATCCAGTTC
CACCTGTTGAACCAAAAAATAAAGGTAATGCTTTTACATATAGGAAGGAAAAGGATCAGTATAAACAAGAGTTAGTTAAA
TATAAAACTCTACGTCAAAATGATCTGCAAATTTTGGCTGATCATAATAATTCGGTGCAAGAGTGGCACAGTCAGAGTGA
GGAAAAAATTAATGAGTTTCTCACAACTCAAGTTAAACCTATTTTAGCACGTCCTGTTAATTGTGGGAGTAGTGATATTC
AAGGAGGAATTAACCGTGCTAAGTTATTTTTAGGGGAAAGTGATCTGACTTGGAGACAAACACCTCAAAAGTTTGCTGTT
TTTATTACTGATGGTTTGGATAATGTTGGCGTTCAACCTGTGGAGTTTAAGAGTAATGCTGAGGTTTTGTTAGTAAATGG
CGCGGGAGGTAAGGGGATATTTGAAAATATTGAGCACAAGGCTTTTGAGTCTGTACCTGCTGCTTTTCGGTATTTGGTTA
CTCAGGTGAATAAGGGAGAAAATTGA

Upstream 100 bases:

>100_bases
AGTTCTTTTTCAAGCTGTTAAATAAATAGAACAGATAATTTACGGTTTGACATCAGGCAAATTTATCAACTTAAGGATCA
ACACTTTGAGCTAAAAAACA

Downstream 100 bases:

>100_bases
GTATGCATAATTCGTCTTTGGGTGAGGAAGGTCAAAATTTTCAGTCGGCAAAAGAAGACTACTATAAAAAGTTAGCAGGG
TGGAAACAACAAGATGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MIVTILKIYGILIIISTILSIASCAGKVDGKTSIKTTSPIISEPLPEVKNALQNQARSTPVKVVILIDKTVSADWSRIEG
PKTQDVQSSLRLLKINGGELAVGNFCDDSNRPLERVRVEQQPLLEKVVFHHPVPPVEPKNKGNAFTYRKEKDQYKQELVK
YKTLRQNDLQILADHNNSVQEWHSQSEEKINEFLTTQVKPILARPVNCGSSDIQGGINRAKLFLGESDLTWRQTPQKFAV
FITDGLDNVGVQPVEFKSNAEVLLVNGAGGKGIFENIEHKAFESVPAAFRYLVTQVNKGEN

Sequences:

>Translated_301_residues
MIVTILKIYGILIIISTILSIASCAGKVDGKTSIKTTSPIISEPLPEVKNALQNQARSTPVKVVILIDKTVSADWSRIEG
PKTQDVQSSLRLLKINGGELAVGNFCDDSNRPLERVRVEQQPLLEKVVFHHPVPPVEPKNKGNAFTYRKEKDQYKQELVK
YKTLRQNDLQILADHNNSVQEWHSQSEEKINEFLTTQVKPILARPVNCGSSDIQGGINRAKLFLGESDLTWRQTPQKFAV
FITDGLDNVGVQPVEFKSNAEVLLVNGAGGKGIFENIEHKAFESVPAAFRYLVTQVNKGEN
>Mature_301_residues
MIVTILKIYGILIIISTILSIASCAGKVDGKTSIKTTSPIISEPLPEVKNALQNQARSTPVKVVILIDKTVSADWSRIEG
PKTQDVQSSLRLLKINGGELAVGNFCDDSNRPLERVRVEQQPLLEKVVFHHPVPPVEPKNKGNAFTYRKEKDQYKQELVK
YKTLRQNDLQILADHNNSVQEWHSQSEEKINEFLTTQVKPILARPVNCGSSDIQGGINRAKLFLGESDLTWRQTPQKFAV
FITDGLDNVGVQPVEFKSNAEVLLVNGAGGKGIFENIEHKAFESVPAAFRYLVTQVNKGEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33467; Mature: 33467

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTILKIYGILIIISTILSIASCAGKVDGKTSIKTTSPIISEPLPEVKNALQNQARSTP
CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCC
VKVVILIDKTVSADWSRIEGPKTQDVQSSLRLLKINGGELAVGNFCDDSNRPLERVRVEQ
EEEEEEEECCCCCCHHHCCCCCCHHHHCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHH
QPLLEKVVFHHPVPPVEPKNKGNAFTYRKEKDQYKQELVKYKTLRQNDLQILADHNNSVQ
HHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH
EWHSQSEEKINEFLTTQVKPILARPVNCGSSDIQGGINRAKLFLGESDLTWRQTPQKFAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCHHCCCCCEEE
FITDGLDNVGVQPVEFKSNAEVLLVNGAGGKGIFENIEHKAFESVPAAFRYLVTQVNKGE
EEECCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
N
C
>Mature Secondary Structure
MIVTILKIYGILIIISTILSIASCAGKVDGKTSIKTTSPIISEPLPEVKNALQNQARSTP
CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCC
VKVVILIDKTVSADWSRIEGPKTQDVQSSLRLLKINGGELAVGNFCDDSNRPLERVRVEQ
EEEEEEEECCCCCCHHHCCCCCCHHHHCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHH
QPLLEKVVFHHPVPPVEPKNKGNAFTYRKEKDQYKQELVKYKTLRQNDLQILADHNNSVQ
HHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH
EWHSQSEEKINEFLTTQVKPILARPVNCGSSDIQGGINRAKLFLGESDLTWRQTPQKFAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCHHCCCCCEEE
FITDGLDNVGVQPVEFKSNAEVLLVNGAGGKGIFENIEHKAFESVPAAFRYLVTQVNKGE
EEECCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA