Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476141

Identifier: 113476141

GI number: 113476141

Start: 3891979

End: 3893157

Strand: Direct

Name: 113476141

Synonym: Tery_2524

Alternate gene names: NA

Gene position: 3891979-3893157 (Clockwise)

Preceding gene: 113476136

Following gene: 113476142

Centisome position: 50.22

GC content: 32.23

Gene sequence:

>1179_bases
ATGAGTATTGAGAGCTTAGAAAAAAATCCTACAAAAAAGTCAGTTGCTGTCTTTTATCCCTTGTTTTCTGGTGGAGGTGC
AGAAGCAGTTTGTCTTTGGATATTAGAAGCTTTAAAAGAAACATATGATCTGACACTATTTACTGTATTTGATGTAGATT
TTGACAAACTCAATTCCATGTATGGAACTCAAATTTCCCAGGAAATGGTAAAGATTAGAGCAATCTTTCCTACAGTAACT
AAAACTTTGTTAAGATTTTTATTTGCCAATAATAGAGATTTAGCAATCTTAGTAATGCATCTTCTACTGCGCCATCTGAA
AGCTCATAATCAGGAATATGATTTATTATTATCAGGTTACAATGCTGTAGACTTTGGTCGTGTCGGAATTCAATATGTTC
ATTGGATTAATGTGATTCCTAATGATGGATTGTATGGTAAAATTTCTAACTCTTCCTTGGAGAATGTCAAACTTAATATA
TCAATTACAAATTCCTTTGCAGTATCTAAAGTTTTAAAAGATACATATGCTATTGATGCTAAAGTTGTGTATCCACCTGT
TTTACTTAACGATCAAAATATATCTTGGGAACAAAAAGAAAATGCTTTTATTTGCAGCGGAAGATTGACAGAAGCTAAAG
CTCCTCATAAAGCTATTCAAATCTTGAAAAAAGTTCGTCAAAAAGGATTTGATGTTAAGCTTTACATTACAGGAGGGGGA
GCCGGAATATATGGGTGGAAATATAAACGAACATTAACAAAAATGGCCAATGAAAATAGTGAATGGGTAAAATTGTATGA
AAATCTGCCTTATAAAGAATATGTTAACATTCTAGCCAAGTGTAGATATGGTATTCACTACAAATCAGAACCATTTGGCA
TTTCAATAGCAGAAATGATGAAAGCAGGTGCAATACCTATTGTCAGAAATAAACGAGGACACTCAGCAGCAGGACAAGTG
GAGATACTTGGAGAAGAAAATCAAGAGTTATTTTTTGAGAATCAAGATGAAGCAGTAGAAAAAATCACTAATATTCTCCA
AAATTCAGAAATACAGGAAAAACTTCAAGCATCTCTACTTAAGAGAAAAGATATTTTTTCCACTGGTAGATTTATGACTG
GTATTCGTCAGGTTGTAAAAAATTATTTTGAACAATATGATGCTTCTGTTATAAGTTAA

Upstream 100 bases:

>100_bases
ACAGCTCAAATAAGATTGCTATAGTTAAAAATATTGACACAATACCGAAAAAAATGATACTTTATCAGCATATTATTAAG
TAAGCATTATAATTAAACTA

Downstream 100 bases:

>100_bases
ATATTTAAATTAGATTTTTGAAGCTCAAGTATTCTTAATAGTAGGTTTAAACTGTATAAATAAAACCGAAAAAATATAGC
CTATAACAATTATTATAATA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Group 1 Glycosyltransferase; Glycosyl Transferase

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSMYGTQISQEMVKIRAIFPTVT
KTLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGYNAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNI
SITNSFAVSKVLKDTYAIDAKVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGG
AGIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMMKAGAIPIVRNKRGHSAAGQV
EILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLLKRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS

Sequences:

>Translated_392_residues
MSIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSMYGTQISQEMVKIRAIFPTVT
KTLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGYNAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNI
SITNSFAVSKVLKDTYAIDAKVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGG
AGIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMMKAGAIPIVRNKRGHSAAGQV
EILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLLKRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS
>Mature_391_residues
SIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSMYGTQISQEMVKIRAIFPTVTK
TLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGYNAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNIS
ITNSFAVSKVLKDTYAIDAKVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGGA
GIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMMKAGAIPIVRNKRGHSAAGQVE
ILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLLKRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44556; Mature: 44425

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSM
CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEEECCHHHHHHH
YGTQISQEMVKIRAIFPTVTKTLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
NAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNISITNSFAVSKVLKDTYAIDA
CCCCHHHHHHEEEEEEEECCCCCCEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHHCCE
KVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGG
EEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
AGIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMM
CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
KAGAIPIVRNKRGHSAAGQVEILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLL
HCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHH
KRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIESLEKNPTKKSVAVFYPLFSGGGAEAVCLWILEALKETYDLTLFTVFDVDFDKLNSM
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEEECCHHHHHHH
YGTQISQEMVKIRAIFPTVTKTLLRFLFANNRDLAILVMHLLLRHLKAHNQEYDLLLSGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
NAVDFGRVGIQYVHWINVIPNDGLYGKISNSSLENVKLNISITNSFAVSKVLKDTYAIDA
CCCCHHHHHHEEEEEEEECCCCCCEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHHCCE
KVVYPPVLLNDQNISWEQKENAFICSGRLTEAKAPHKAIQILKKVRQKGFDVKLYITGGG
EEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
AGIYGWKYKRTLTKMANENSEWVKLYENLPYKEYVNILAKCRYGIHYKSEPFGISIAEMM
CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
KAGAIPIVRNKRGHSAAGQVEILGEENQELFFENQDEAVEKITNILQNSEIQEKLQASLL
HCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHH
KRKDIFSTGRFMTGIRQVVKNYFEQYDASVIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA