Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475778

Identifier: 113475778

GI number: 113475778

Start: 3328892

End: 3330991

Strand: Direct

Name: 113475778

Synonym: Tery_2132

Alternate gene names: NA

Gene position: 3328892-3330991 (Clockwise)

Preceding gene: 113475777

Following gene: 113475779

Centisome position: 42.95

GC content: 29.86

Gene sequence:

>2100_bases
ATGTCTAATAGTTATTATATTTATCGTATTCATCTGAAAAATCATCATAATGTGGAAATTGAAAGATATAATCATAAAAA
AAAATTGCCAGGAAGCTCGTCTGGAAAGTTTTGTTATCAAGAAAAAGAAAAAGAAATTCAAAAGCTTTTGGAAGTTGCTA
TTAATAATGAACTAAATGCAGAACAAACCAGTCAGTTGGGGGAAGCTTTATTTAATAGTTTATTTGATTCTAGATTATGC
CAAGATTTTATTAATTTTTACTTTGAAGTTGTACAGAAAAAAAAGCAAAAATTACGAATAGAATTAGATATTGATGAAAA
AGAAATGCCAGAATTTGCTGCTTTACCTTGGGAATTTTTATGTATTCCTGAAGAAGTTAATCAAGGTACGATTTGGTTAG
GAACAGATCCTAATTTAATATTTTCTCGCCGTCGTGCTTTATGGAATTCTGCTAAGACAATACAATTAGAAAAAGATGAA
AAATTGAGAATTGCTTTAGCTATTTCTGCACCTGAAAATGAAGGTCCTGTCGAATATGCAGAAGTACAAGAGTATTTAGA
AGAGTTGGCTAAGAAACAATCTGAACAAATTGAATTATTACCTATAATAAATCCAGCTACAAAAATTGAAATTGATAGAT
TATTAGAGAAAAAACCTCATATTTTTCATTTTATTGGTCATGGTCGTTTTGAGGATGAAGCAGAGAAAAAAGTAGGAAAA
ATTGCTTTAGGAAAAAAAGTTGGAAAAAAAATATTAGCTAGATGGGTTAGTGAGAAATTCTTTGCTCAATTATTTGTTCG
TCATCGTCCTGGTATTGTTGTTTTACAAGCTTGTGAAGGAGGAAAGCAGTCTGCATCTGAAGCTTTTAAGGGAGTTGCTT
CTAAAATTGTGGCTCAAAGTATTCCTGTGGTAGTGGCAATGCAATATAAGGTACAGAATGCTACAGCTAATGCTTTTTCT
ACGGAATTTTATAGGAGATTAGCAAAGGGTGAACCTGTTGATATTGCTGCTCAAAATGGTCGTCATGATGTGGCTTTACA
AACTGATTATTCAGGTAATGATTTTGCTACACCTGTTATTTTTATGAGTGTAGAAGATGGTTGTTTATTTCAAAAGGAAG
AGGTTCAAAAAAAAATAGTATCTGATTCTTTTTCGTTATCTGAAATAAACCCCAACCAAACGTTTAATATTATTGATGAT
AATGTTGTGGAAAATCAGAAAAATCAGTGTCTTGATGATAATAATTATGTTTATTTGGCGATAGATTTAAAATTAGAAAG
CACAAAAATTCAGAAAAATGATGCAGACAAATTCCTGGTTAATACATGGTTGGCAATTCCTCAATCTTCTCAAAGTTTTT
ATCATAAAAATTTGTTAAATACTTTTGAATATAATCGAACTTATAGTCAGGCAGAGGTTGAAGAAAAAATTATGAAACTA
ATTGCAGAATGTAATGAAGAATTAGCAAATATTTTCCCTCCAGAAAAAGATTGGGAGATTGCTATAGAATGGGTTCTTCC
TAATAATTTATTATCTCTACCTGTTGACTGTTGGGAGTATCGAAAAAATGAAAGGATAGGACGTGGTAAATTTCTTTCTG
TTCATATTCGTTCATCTCAACGTTTACACATAGCTTATAAACATTATCATAAATCATGGAAAGATAAATGGAACTATCTT
CAGGGAAACATACAAAATATTAATTTGGGTAACTATATTTTAGCTTGCCAATGTCAAAATATTAATGATAATTATTTGAA
AAATATTGATAATAAAAAGAAGATTCTGGGGATTAATTTCCCCTTCAAAATAGAAGAGTTAGAAAATATTACTTATGAGT
TAATGATAGAAACAGGAATTCCTATAGCTTTGTGGTCTAGATGTAAAGAGTCTAATGTGAATCACCTTATAGATTTAGAT
ACATTGATAAACCCCAATAATGAAAATGTTTTAAATCTACAAAATTTACCTGAATATGTGGAACAGAAGAGGTTAGACTC
TCATTCAAATGACCCTCATCATTTAGGACATCATCTTTGCTTTTTATGTGAAAATCCTTATAATTATCCAATAAAAAGAA
AATTAAATTTTGGGTATTAA

Upstream 100 bases:

>100_bases
TTTCAGAGGTGACAATGAAAAGTGGGATTTAAAGCTGCCACAGTAAATGTATCTTGTTGTTTAGTTTGATATTTATTAAT
TTTTAAATAAGTGTTGACTG

Downstream 100 bases:

>100_bases
TTTAGTACTGTTTATTAGCTGACCTTGTGGGAAAAATTAATGGATTTGGTAGTAACATTTTATCAGTTTATTAATTTTGA
AACCTGAAACATAACACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 699; Mature: 698

Protein sequence:

>699_residues
MSNSYYIYRIHLKNHHNVEIERYNHKKKLPGSSSGKFCYQEKEKEIQKLLEVAINNELNAEQTSQLGEALFNSLFDSRLC
QDFINFYFEVVQKKKQKLRIELDIDEKEMPEFAALPWEFLCIPEEVNQGTIWLGTDPNLIFSRRRALWNSAKTIQLEKDE
KLRIALAISAPENEGPVEYAEVQEYLEELAKKQSEQIELLPIINPATKIEIDRLLEKKPHIFHFIGHGRFEDEAEKKVGK
IALGKKVGKKILARWVSEKFFAQLFVRHRPGIVVLQACEGGKQSASEAFKGVASKIVAQSIPVVVAMQYKVQNATANAFS
TEFYRRLAKGEPVDIAAQNGRHDVALQTDYSGNDFATPVIFMSVEDGCLFQKEEVQKKIVSDSFSLSEINPNQTFNIIDD
NVVENQKNQCLDDNNYVYLAIDLKLESTKIQKNDADKFLVNTWLAIPQSSQSFYHKNLLNTFEYNRTYSQAEVEEKIMKL
IAECNEELANIFPPEKDWEIAIEWVLPNNLLSLPVDCWEYRKNERIGRGKFLSVHIRSSQRLHIAYKHYHKSWKDKWNYL
QGNIQNINLGNYILACQCQNINDNYLKNIDNKKKILGINFPFKIEELENITYELMIETGIPIALWSRCKESNVNHLIDLD
TLINPNNENVLNLQNLPEYVEQKRLDSHSNDPHHLGHHLCFLCENPYNYPIKRKLNFGY

Sequences:

>Translated_699_residues
MSNSYYIYRIHLKNHHNVEIERYNHKKKLPGSSSGKFCYQEKEKEIQKLLEVAINNELNAEQTSQLGEALFNSLFDSRLC
QDFINFYFEVVQKKKQKLRIELDIDEKEMPEFAALPWEFLCIPEEVNQGTIWLGTDPNLIFSRRRALWNSAKTIQLEKDE
KLRIALAISAPENEGPVEYAEVQEYLEELAKKQSEQIELLPIINPATKIEIDRLLEKKPHIFHFIGHGRFEDEAEKKVGK
IALGKKVGKKILARWVSEKFFAQLFVRHRPGIVVLQACEGGKQSASEAFKGVASKIVAQSIPVVVAMQYKVQNATANAFS
TEFYRRLAKGEPVDIAAQNGRHDVALQTDYSGNDFATPVIFMSVEDGCLFQKEEVQKKIVSDSFSLSEINPNQTFNIIDD
NVVENQKNQCLDDNNYVYLAIDLKLESTKIQKNDADKFLVNTWLAIPQSSQSFYHKNLLNTFEYNRTYSQAEVEEKIMKL
IAECNEELANIFPPEKDWEIAIEWVLPNNLLSLPVDCWEYRKNERIGRGKFLSVHIRSSQRLHIAYKHYHKSWKDKWNYL
QGNIQNINLGNYILACQCQNINDNYLKNIDNKKKILGINFPFKIEELENITYELMIETGIPIALWSRCKESNVNHLIDLD
TLINPNNENVLNLQNLPEYVEQKRLDSHSNDPHHLGHHLCFLCENPYNYPIKRKLNFGY
>Mature_698_residues
SNSYYIYRIHLKNHHNVEIERYNHKKKLPGSSSGKFCYQEKEKEIQKLLEVAINNELNAEQTSQLGEALFNSLFDSRLCQ
DFINFYFEVVQKKKQKLRIELDIDEKEMPEFAALPWEFLCIPEEVNQGTIWLGTDPNLIFSRRRALWNSAKTIQLEKDEK
LRIALAISAPENEGPVEYAEVQEYLEELAKKQSEQIELLPIINPATKIEIDRLLEKKPHIFHFIGHGRFEDEAEKKVGKI
ALGKKVGKKILARWVSEKFFAQLFVRHRPGIVVLQACEGGKQSASEAFKGVASKIVAQSIPVVVAMQYKVQNATANAFST
EFYRRLAKGEPVDIAAQNGRHDVALQTDYSGNDFATPVIFMSVEDGCLFQKEEVQKKIVSDSFSLSEINPNQTFNIIDDN
VVENQKNQCLDDNNYVYLAIDLKLESTKIQKNDADKFLVNTWLAIPQSSQSFYHKNLLNTFEYNRTYSQAEVEEKIMKLI
AECNEELANIFPPEKDWEIAIEWVLPNNLLSLPVDCWEYRKNERIGRGKFLSVHIRSSQRLHIAYKHYHKSWKDKWNYLQ
GNIQNINLGNYILACQCQNINDNYLKNIDNKKKILGINFPFKIEELENITYELMIETGIPIALWSRCKESNVNHLIDLDT
LINPNNENVLNLQNLPEYVEQKRLDSHSNDPHHLGHHLCFLCENPYNYPIKRKLNFGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81141; Mature: 81010

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSYYIYRIHLKNHHNVEIERYNHKKKLPGSSSGKFCYQEKEKEIQKLLEVAINNELNA
CCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
EQTSQLGEALFNSLFDSRLCQDFINFYFEVVQKKKQKLRIELDIDEKEMPEFAALPWEFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHCCHHHCCCEEEE
CIPEEVNQGTIWLGTDPNLIFSRRRALWNSAKTIQLEKDEKLRIALAISAPENEGPVEYA
EEHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCCHH
EVQEYLEELAKKQSEQIELLPIINPATKIEIDRLLEKKPHIFHFIGHGRFEDEAEKKVGK
HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
IALGKKVGKKILARWVSEKFFAQLFVRHRPGIVVLQACEGGKQSASEAFKGVASKIVAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
IPVVVAMQYKVQNATANAFSTEFYRRLAKGEPVDIAAQNGRHDVALQTDYSGNDFATPVI
CCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCEEE
FMSVEDGCLFQKEEVQKKIVSDSFSLSEINPNQTFNIIDDNVVENQKNQCLDDNNYVYLA
EEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCCCEEEEE
IDLKLESTKIQKNDADKFLVNTWLAIPQSSQSFYHKNLLNTFEYNRTYSQAEVEEKIMKL
EEEEEECCCCCCCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IAECNEELANIFPPEKDWEIAIEWVLPNNLLSLPVDCWEYRKNERIGRGKFLSVHIRSSQ
HHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCCHHHHHHCCCCCCCCCEEEEEECCCC
RLHIAYKHYHKSWKDKWNYLQGNIQNINLGNYILACQCQNINDNYLKNIDNKKKILGINF
EEEEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHHCCCCCCEEEEECC
PFKIEELENITYELMIETGIPIALWSRCKESNVNHLIDLDTLINPNNENVLNLQNLPEYV
CEEHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEHHEECCCCCCEEEHHHHHHHH
EQKRLDSHSNDPHHLGHHLCFLCENPYNYPIKRKLNFGY
HHHHCCCCCCCHHHHCCEEEEEECCCCCCCCEECCCCCC
>Mature Secondary Structure 
SNSYYIYRIHLKNHHNVEIERYNHKKKLPGSSSGKFCYQEKEKEIQKLLEVAINNELNA
CCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
EQTSQLGEALFNSLFDSRLCQDFINFYFEVVQKKKQKLRIELDIDEKEMPEFAALPWEFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHCCHHHCCCEEEE
CIPEEVNQGTIWLGTDPNLIFSRRRALWNSAKTIQLEKDEKLRIALAISAPENEGPVEYA
EEHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCCHH
EVQEYLEELAKKQSEQIELLPIINPATKIEIDRLLEKKPHIFHFIGHGRFEDEAEKKVGK
HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
IALGKKVGKKILARWVSEKFFAQLFVRHRPGIVVLQACEGGKQSASEAFKGVASKIVAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
IPVVVAMQYKVQNATANAFSTEFYRRLAKGEPVDIAAQNGRHDVALQTDYSGNDFATPVI
CCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCEEE
FMSVEDGCLFQKEEVQKKIVSDSFSLSEINPNQTFNIIDDNVVENQKNQCLDDNNYVYLA
EEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCCCEEEEE
IDLKLESTKIQKNDADKFLVNTWLAIPQSSQSFYHKNLLNTFEYNRTYSQAEVEEKIMKL
EEEEEECCCCCCCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IAECNEELANIFPPEKDWEIAIEWVLPNNLLSLPVDCWEYRKNERIGRGKFLSVHIRSSQ
HHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCCHHHHHHCCCCCCCCCEEEEEECCCC
RLHIAYKHYHKSWKDKWNYLQGNIQNINLGNYILACQCQNINDNYLKNIDNKKKILGINF
EEEEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHHCCCCCCEEEEECC
PFKIEELENITYELMIETGIPIALWSRCKESNVNHLIDLDTLINPNNENVLNLQNLPEYV
CEEHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEHHEECCCCCCEEEHHHHHHHH
EQKRLDSHSNDPHHLGHHLCFLCENPYNYPIKRKLNFGY
HHHHCCCCCCCHHHHCCEEEEEECCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA