| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475779
Identifier: 113475779
GI number: 113475779
Start: 3331996
End: 3332943
Strand: Direct
Name: 113475779
Synonym: Tery_2133
Alternate gene names: NA
Gene position: 3331996-3332943 (Clockwise)
Preceding gene: 113475778
Following gene: 113475780
Centisome position: 42.99
GC content: 33.65
Gene sequence:
>948_bases ATGAGTAATTGGCAAATTTTTAAGGGAAATAATACACCTCATACTGTTAGTAAATGGCCGGAACCTCCCCCTTGGCGGAA TTTTAATCAACAGCAGGAACCAAAGAATAATTTTCAAGCAAATGAGAAAGTTATTAACGCTGTTAATATGGCTATTTATT TACATCGCCCACTTTTGGTAACAGGAAAACCAGGAACCGGTAAATCTAGTTTAGCGAGGGCGATCGCTTCGGAATTACAA TTAGGAAAAGTCTTACATTGGCCAATTAATACCCGGAGTACTTTACAGGAGGGATTATATTATTATGACGCGATCGCTCG TCTACAGGATGCTCAAATTAATCAACAGGAAAAAGATAAGTTTAATATTGGAAATTATATACGTTTAGGAGCTTTAGGAA CTGCGATGTGTTCTTCTGAAAAACCGAGGGTATTACTAATTGATGAAATTGATAAAAGTGACATTGATTTACCTAATGAT TTACTCAATATTTTTGAGGATGGCTATTTTATTATTAAAGAACTACAAAGATTGAAAAAATATCAGAATTCTCAAAAAAT AAGTGTTGAAACTTATGATGGTAAGACTCATAAAGTTGAGGATGGAATGATAGCCTGCAAGAAATTTCCTATTGTAATAA TGACGAGTAATGGAGAAAGAGAATTTCCTTTACCTTTTAAGCGTCGCTGTATTCAACTAGAAATTAATGAACCTAATATT GAGGAACTAACTAATATTATTAAAGCCCATTTAGGAGATGATTTAACTCAAGATATTGAAGCAAGAATTTCTGAGTTTGT GAAAAAAAGAGACAAGGGACCTTTGGCAACAGATCAATTACTTAATGTGGCATTTATGTTGATGAATAAGCCATTGCCTA ATGCTGGGGAAAAAGAGGAAATAATTCAACGTTTAATGGCATATCTCAACACAACTGGAGAAGAATAA
Upstream 100 bases:
>100_bases TTTAAACCTAAAACCTAAAGCCTAAAACCTAACACCTAACACCTAATACCTAAAGTCTAATACCTAAAACCTAAAACCTA ACACCTAACACCTAAAACTT
Downstream 100 bases:
>100_bases TAATTAAAATGATAGCTTGTAGTATTGGGCTTAAGTTATTAGATAAAGTAGTTATAGAACAGCTCGCAGTAGATGGCTGC AGTTATTAGAAAAAGTAGTT
Product: ATPase-like protein
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA ATPase; AAA Family ATPase; ATPase AAA Family Protein; ATPase-Like Protein; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; ATPase Protein
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSNWQIFKGNNTPHTVSKWPEPPPWRNFNQQQEPKNNFQANEKVINAVNMAIYLHRPLLVTGKPGTGKSSLARAIASELQ LGKVLHWPINTRSTLQEGLYYYDAIARLQDAQINQQEKDKFNIGNYIRLGALGTAMCSSEKPRVLLIDEIDKSDIDLPND LLNIFEDGYFIIKELQRLKKYQNSQKISVETYDGKTHKVEDGMIACKKFPIVIMTSNGEREFPLPFKRRCIQLEINEPNI EELTNIIKAHLGDDLTQDIEARISEFVKKRDKGPLATDQLLNVAFMLMNKPLPNAGEKEEIIQRLMAYLNTTGEE
Sequences:
>Translated_315_residues MSNWQIFKGNNTPHTVSKWPEPPPWRNFNQQQEPKNNFQANEKVINAVNMAIYLHRPLLVTGKPGTGKSSLARAIASELQ LGKVLHWPINTRSTLQEGLYYYDAIARLQDAQINQQEKDKFNIGNYIRLGALGTAMCSSEKPRVLLIDEIDKSDIDLPND LLNIFEDGYFIIKELQRLKKYQNSQKISVETYDGKTHKVEDGMIACKKFPIVIMTSNGEREFPLPFKRRCIQLEINEPNI EELTNIIKAHLGDDLTQDIEARISEFVKKRDKGPLATDQLLNVAFMLMNKPLPNAGEKEEIIQRLMAYLNTTGEE >Mature_314_residues SNWQIFKGNNTPHTVSKWPEPPPWRNFNQQQEPKNNFQANEKVINAVNMAIYLHRPLLVTGKPGTGKSSLARAIASELQL GKVLHWPINTRSTLQEGLYYYDAIARLQDAQINQQEKDKFNIGNYIRLGALGTAMCSSEKPRVLLIDEIDKSDIDLPNDL LNIFEDGYFIIKELQRLKKYQNSQKISVETYDGKTHKVEDGMIACKKFPIVIMTSNGEREFPLPFKRRCIQLEINEPNIE ELTNIIKAHLGDDLTQDIEARISEFVKKRDKGPLATDQLLNVAFMLMNKPLPNAGEKEEIIQRLMAYLNTTGEE
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36056; Mature: 35925
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNWQIFKGNNTPHTVSKWPEPPPWRNFNQQQEPKNNFQANEKVINAVNMAIYLHRPLLV CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHEEEEECCEEE TGKPGTGKSSLARAIASELQLGKVLHWPINTRSTLQEGLYYYDAIARLQDAQINQQEKDK ECCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCC FNIGNYIRLGALGTAMCSSEKPRVLLIDEIDKSDIDLPNDLLNIFEDGYFIIKELQRLKK CCCCCEEEECHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH YQNSQKISVETYDGKTHKVEDGMIACKKFPIVIMTSNGEREFPLPFKRRCIQLEINEPNI HCCCCEEEEEEECCCCEECCCCEEEEEECCEEEEECCCCCCCCCHHHCCEEEEEECCCCH EELTNIIKAHLGDDLTQDIEARISEFVKKRDKGPLATDQLLNVAFMLMNKPLPNAGEKEE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH IIQRLMAYLNTTGEE HHHHHHHHHHCCCCC >Mature Secondary Structure SNWQIFKGNNTPHTVSKWPEPPPWRNFNQQQEPKNNFQANEKVINAVNMAIYLHRPLLV CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHEEEEECCEEE TGKPGTGKSSLARAIASELQLGKVLHWPINTRSTLQEGLYYYDAIARLQDAQINQQEKDK ECCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCC FNIGNYIRLGALGTAMCSSEKPRVLLIDEIDKSDIDLPNDLLNIFEDGYFIIKELQRLKK CCCCCEEEECHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH YQNSQKISVETYDGKTHKVEDGMIACKKFPIVIMTSNGEREFPLPFKRRCIQLEINEPNI HCCCCEEEEEEECCCCEECCCCEEEEEECCEEEEECCCCCCCCCHHHCCEEEEEECCCCH EELTNIIKAHLGDDLTQDIEARISEFVKKRDKGPLATDQLLNVAFMLMNKPLPNAGEKEE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH IIQRLMAYLNTTGEE HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA