Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475777

Identifier: 113475777

GI number: 113475777

Start: 3327935

End: 3328837

Strand: Direct

Name: 113475777

Synonym: Tery_2131

Alternate gene names: NA

Gene position: 3327935-3328837 (Clockwise)

Preceding gene: 113475776

Following gene: 113475778

Centisome position: 42.94

GC content: 32.23

Gene sequence:

>903_bases
ATGAATACTAAATTCGATTCACCTGACTTTATTCAAGCAGAAAGTTTGCTACAAGAATTATTTGAAGAGTTACAAAAACA
AGAAGGTTTATTGGCTGGGGGTCAAAAGCTGGGAATTACTACCAGTATAATTAAAGATTTACAGGAGACTAAAGTTAGTT
TTGGCAACCCTAAAAATGAGTTAATTCCCTTAACAGAAGAAATATTTAAAGAGGCTGAGATAGAGTTAAATCATCTAATC
AAGCAACAAATGAAGGATGATTATAATTTTTATTATTTGACTCTAAATGTTAATTTGCTTCCCCAGCCAGGAGCTAAATT
TTGGCGTTTAACTTGTAAACTTAAGTTAAGTGAAGAAAAAACAATCATTCAAAGTATTTTTCCTGAACATAAATGGCAAC
CAGTTATCAAAATTGGTGTGGGTATGGATATAGGAATTAATCAGAATTTAACTTGGGATGCTGGTATTGACTCTTCCATG
ATAACAGAGGTCTTGAAGTTTGTTCCAGCTAATTTGAAAGCTAATATTGTAAGTAAAAATAAATTTAAAGCTTTTGCTGT
TATTCCTGACTGTAAATATGAGTTAGGTCGTCCAGAAATTGTAGCTGAAGGAATAGGTTCACCAGAGTGTTATTGGCGAA
TTCAAGACAAGAACATACAGAAAGTTGGTACGGTTAAGTTTGGAGTTATTTTCAAAGTTCCTAAACAAACAAAATCTATT
ACTTTAACTGGAATAACTTTGGCTAATATAGATATTAATTTGTTGACAGATAATATTAGCGATATTGTTTTAGCTAGGCT
TCCTGAAAAAATTCAAGAGTGGTTAGGTTTGGATGCAGAAGAGTCAGCTAAAAAATTTTTCAGAGGTGACAATGAAAAGT
GGGATTTAAAGCTGCCACAGTAA

Upstream 100 bases:

>100_bases
TCCTAAGATAAACACAAGACTAAAGTTTAACTACAAACTATAATATAATTATATCACTCATGAATTATATTGTTGTTATT
TGGCTTACTCAAAAAAATTA

Downstream 100 bases:

>100_bases
ATGTATCTTGTTGTTTAGTTTGATATTTATTAATTTTTAAATAAGTGTTGACTGATGTCTAATAGTTATTATATTTATCG
TATTCATCTGAAAAATCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNTKFDSPDFIQAESLLQELFEELQKQEGLLAGGQKLGITTSIIKDLQETKVSFGNPKNELIPLTEEIFKEAEIELNHLI
KQQMKDDYNFYYLTLNVNLLPQPGAKFWRLTCKLKLSEEKTIIQSIFPEHKWQPVIKIGVGMDIGINQNLTWDAGIDSSM
ITEVLKFVPANLKANIVSKNKFKAFAVIPDCKYELGRPEIVAEGIGSPECYWRIQDKNIQKVGTVKFGVIFKVPKQTKSI
TLTGITLANIDINLLTDNISDIVLARLPEKIQEWLGLDAEESAKKFFRGDNEKWDLKLPQ

Sequences:

>Translated_300_residues
MNTKFDSPDFIQAESLLQELFEELQKQEGLLAGGQKLGITTSIIKDLQETKVSFGNPKNELIPLTEEIFKEAEIELNHLI
KQQMKDDYNFYYLTLNVNLLPQPGAKFWRLTCKLKLSEEKTIIQSIFPEHKWQPVIKIGVGMDIGINQNLTWDAGIDSSM
ITEVLKFVPANLKANIVSKNKFKAFAVIPDCKYELGRPEIVAEGIGSPECYWRIQDKNIQKVGTVKFGVIFKVPKQTKSI
TLTGITLANIDINLLTDNISDIVLARLPEKIQEWLGLDAEESAKKFFRGDNEKWDLKLPQ
>Mature_300_residues
MNTKFDSPDFIQAESLLQELFEELQKQEGLLAGGQKLGITTSIIKDLQETKVSFGNPKNELIPLTEEIFKEAEIELNHLI
KQQMKDDYNFYYLTLNVNLLPQPGAKFWRLTCKLKLSEEKTIIQSIFPEHKWQPVIKIGVGMDIGINQNLTWDAGIDSSM
ITEVLKFVPANLKANIVSKNKFKAFAVIPDCKYELGRPEIVAEGIGSPECYWRIQDKNIQKVGTVKFGVIFKVPKQTKSI
TLTGITLANIDINLLTDNISDIVLARLPEKIQEWLGLDAEESAKKFFRGDNEKWDLKLPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34099; Mature: 34099

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKFDSPDFIQAESLLQELFEELQKQEGLLAGGQKLGITTSIIKDLQETKVSFGNPKNE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
LIPLTEEIFKEAEIELNHLIKQQMKDDYNFYYLTLNVNLLPQPGAKFWRLTCKLKLSEEK
EECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCHH
TIIQSIFPEHKWQPVIKIGVGMDIGINQNLTWDAGIDSSMITEVLKFVPANLKANIVSKN
HHHHHHCCCCCCCEEEEEECCEEECCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEECC
KFKAFAVIPDCKYELGRPEIVAEGIGSPECYWRIQDKNIQKVGTVKFGVIFKVPKQTKSI
CEEEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCEECEEEEEEEEECCCCCCEE
TLTGITLANIDINLLTDNISDIVLARLPEKIQEWLGLDAEESAKKFFRGDNEKWDLKLPQ
EEEEEEEEEEEEEEEECCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCC
>Mature Secondary Structure
MNTKFDSPDFIQAESLLQELFEELQKQEGLLAGGQKLGITTSIIKDLQETKVSFGNPKNE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
LIPLTEEIFKEAEIELNHLIKQQMKDDYNFYYLTLNVNLLPQPGAKFWRLTCKLKLSEEK
EECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCHH
TIIQSIFPEHKWQPVIKIGVGMDIGINQNLTWDAGIDSSMITEVLKFVPANLKANIVSKN
HHHHHHCCCCCCCEEEEEECCEEECCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEECC
KFKAFAVIPDCKYELGRPEIVAEGIGSPECYWRIQDKNIQKVGTVKFGVIFKVPKQTKSI
CEEEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCEECEEEEEEEEECCCCCCEE
TLTGITLANIDINLLTDNISDIVLARLPEKIQEWLGLDAEESAKKFFRGDNEKWDLKLPQ
EEEEEEEEEEEEEEEECCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA