Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475365

Identifier: 113475365

GI number: 113475365

Start: 2563253

End: 2564455

Strand: Reverse

Name: 113475365

Synonym: Tery_1682

Alternate gene names: NA

Gene position: 2564455-2563253 (Counterclockwise)

Preceding gene: 113475366

Following gene: 113475364

Centisome position: 33.09

GC content: 33.08

Gene sequence:

>1203_bases
ATGATAAAGCTAAAAACTTGGGCAGTAAATATAGGCATGATTTTTGCCAGTTTATTTGTAGGGATAGCGATGGCTGAAGT
AGCAGTAAGAATTGCTGGTTTAAAGGGATTAAAAAAAATGCCTGAAAGTACCCATGCAGAATTTTATCCCACATTTCATA
CCATTCCTCATCCGGTTAGAGGTTGGGAATATAGAGCAAATGTTTCTGGCTGGTGGACGAGTGAAGGAAAGGCTTATTTA
GAGTTTAATAGTCATGGTATTAGAGGACCAGAAATTACTAAAGCTAAACCAAAAAATACTTTGCGAATAGCTGTACTTGG
AGATTCTTTTACTTCAGCTGTCCAAGTTTCTTATCAGCAAACTTTTGTAGGAGTAATGCAAAAAGAATTGCAAAAATGTA
CGAATTTAAAAAATAAAAAAGTAGAAGTAATTAATTTTGGCGTTGATGGTTATGGAACTGCCCAACAATTATTAACTCTC
CGGGAAAAAGTTTGGGATTTTCAGCCAGATATTGTGCTTTTAGCTTTTTTTATTGGTAATGATGTTACGGATAATTCTCG
AAAGTTAGAAAATAATCATTACCGACCTTTTTTTATCTATAAAAATGATAAGTTAGAGTTAGATTTATCCTTTAGAGAGC
TAACTATTAGTCAGGCAAATCGTTATATGATAACAACGGTTGATAAATTACCGACTTGGCTGATAAATAATGTTAGAATT
TTACAAATAATCAAAAAAGTAGAGACAGATCAAAGAAAGAGAAATGCTGCTAGACACTTTGAAAAATTACAAGCCAATAA
TTTTAGAGAACCACGAAATCTTGCTTGGCAAGAAGCTTGGAAAATTACAGATGAACTAATAGGAATTATGGCTAAAGAAG
TGCAGGAAAAAGGCGCAGAATTTCAGTTGGCGACAGTGATGACTCCTATGCAAATTCATTCCAATAAAGGATGGAGAGAA
GGATATATGAAAATTATGGATATTCAAGACTGGTCGTATCCCACAAAAAGACTGCAAAATTTAGGAGAAATTCATAATTT
TTATGTGATTGATTTAATCAAACCTTTTGATGATTATATTGAGAAAAATCCAGTTTGTTTTCATGGGTTTAAAAATACAG
CAATGTGTACAGGACATTGGAATGCTACAGGGCATAAATTAGCTGGAGAAATTATTGCAAAAAAGTCATGTCAGAGGTTT
TAA

Upstream 100 bases:

>100_bases
ATTAAAAACAATAGCTGATAGCTTTATAGCTGAAAACAGAATAGACTGAATATTATTCAACTTTTATGATTAAATTACAA
AAAAAATTATAGCTAAGAGG

Downstream 100 bases:

>100_bases
AAAAAAATTGTAGGTATAGGTAGTTAATAGTAGATTTGAAGTCAAAAAAACTTAGACTGCTATTCAAATTATGTAGAGTA
TATTGCATCTAATGATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MIKLKTWAVNIGMIFASLFVGIAMAEVAVRIAGLKGLKKMPESTHAEFYPTFHTIPHPVRGWEYRANVSGWWTSEGKAYL
EFNSHGIRGPEITKAKPKNTLRIAVLGDSFTSAVQVSYQQTFVGVMQKELQKCTNLKNKKVEVINFGVDGYGTAQQLLTL
REKVWDFQPDIVLLAFFIGNDVTDNSRKLENNHYRPFFIYKNDKLELDLSFRELTISQANRYMITTVDKLPTWLINNVRI
LQIIKKVETDQRKRNAARHFEKLQANNFREPRNLAWQEAWKITDELIGIMAKEVQEKGAEFQLATVMTPMQIHSNKGWRE
GYMKIMDIQDWSYPTKRLQNLGEIHNFYVIDLIKPFDDYIEKNPVCFHGFKNTAMCTGHWNATGHKLAGEIIAKKSCQRF

Sequences:

>Translated_400_residues
MIKLKTWAVNIGMIFASLFVGIAMAEVAVRIAGLKGLKKMPESTHAEFYPTFHTIPHPVRGWEYRANVSGWWTSEGKAYL
EFNSHGIRGPEITKAKPKNTLRIAVLGDSFTSAVQVSYQQTFVGVMQKELQKCTNLKNKKVEVINFGVDGYGTAQQLLTL
REKVWDFQPDIVLLAFFIGNDVTDNSRKLENNHYRPFFIYKNDKLELDLSFRELTISQANRYMITTVDKLPTWLINNVRI
LQIIKKVETDQRKRNAARHFEKLQANNFREPRNLAWQEAWKITDELIGIMAKEVQEKGAEFQLATVMTPMQIHSNKGWRE
GYMKIMDIQDWSYPTKRLQNLGEIHNFYVIDLIKPFDDYIEKNPVCFHGFKNTAMCTGHWNATGHKLAGEIIAKKSCQRF
>Mature_400_residues
MIKLKTWAVNIGMIFASLFVGIAMAEVAVRIAGLKGLKKMPESTHAEFYPTFHTIPHPVRGWEYRANVSGWWTSEGKAYL
EFNSHGIRGPEITKAKPKNTLRIAVLGDSFTSAVQVSYQQTFVGVMQKELQKCTNLKNKKVEVINFGVDGYGTAQQLLTL
REKVWDFQPDIVLLAFFIGNDVTDNSRKLENNHYRPFFIYKNDKLELDLSFRELTISQANRYMITTVDKLPTWLINNVRI
LQIIKKVETDQRKRNAARHFEKLQANNFREPRNLAWQEAWKITDELIGIMAKEVQEKGAEFQLATVMTPMQIHSNKGWRE
GYMKIMDIQDWSYPTKRLQNLGEIHNFYVIDLIKPFDDYIEKNPVCFHGFKNTAMCTGHWNATGHKLAGEIIAKKSCQRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46245; Mature: 46245

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLKTWAVNIGMIFASLFVGIAMAEVAVRIAGLKGLKKMPESTHAEFYPTFHTIPHPVR
CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GWEYRANVSGWWTSEGKAYLEFNSHGIRGPEITKAKPKNTLRIAVLGDSFTSAVQVSYQQ
CCEEEECCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
TFVGVMQKELQKCTNLKNKKVEVINFGVDGYGTAQQLLTLREKVWDFQPDIVLLAFFIGN
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHEEEEHHCC
DVTDNSRKLENNHYRPFFIYKNDKLELDLSFRELTISQANRYMITTVDKLPTWLINNVRI
CCCCCCHHHCCCCCCEEEEEECCEEEEEEEHHHEEHHCCCCEEEEEHHHCCHHHHCCHHH
LQIIKKVETDQRKRNAARHFEKLQANNFREPRNLAWQEAWKITDELIGIMAKEVQEKGAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FQLATVMTPMQIHSNKGWREGYMKIMDIQDWSYPTKRLQNLGEIHNFYVIDLIKPFDDYI
EEEEEECCCHHCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEHHHHHHH
EKNPVCFHGFKNTAMCTGHWNATGHKLAGEIIAKKSCQRF
CCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKLKTWAVNIGMIFASLFVGIAMAEVAVRIAGLKGLKKMPESTHAEFYPTFHTIPHPVR
CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GWEYRANVSGWWTSEGKAYLEFNSHGIRGPEITKAKPKNTLRIAVLGDSFTSAVQVSYQQ
CCEEEECCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
TFVGVMQKELQKCTNLKNKKVEVINFGVDGYGTAQQLLTLREKVWDFQPDIVLLAFFIGN
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHEEEEHHCC
DVTDNSRKLENNHYRPFFIYKNDKLELDLSFRELTISQANRYMITTVDKLPTWLINNVRI
CCCCCCHHHCCCCCCEEEEEECCEEEEEEEHHHEEHHCCCCEEEEEHHHCCHHHHCCHHH
LQIIKKVETDQRKRNAARHFEKLQANNFREPRNLAWQEAWKITDELIGIMAKEVQEKGAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FQLATVMTPMQIHSNKGWREGYMKIMDIQDWSYPTKRLQNLGEIHNFYVIDLIKPFDDYI
EEEEEECCCHHCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEHHHHHHH
EKNPVCFHGFKNTAMCTGHWNATGHKLAGEIIAKKSCQRF
CCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA