| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475366
Identifier: 113475366
GI number: 113475366
Start: 2565356
End: 2565520
Strand: Reverse
Name: 113475366
Synonym: Tery_1683
Alternate gene names: NA
Gene position: 2565520-2565356 (Counterclockwise)
Preceding gene: 113475367
Following gene: 113475365
Centisome position: 33.1
GC content: 30.3
Gene sequence:
>165_bases ATGTTTGAAGGAATATTAGACTTTCTCAAAGACCTTTGGGGTTTTATGAGAGAGCGAAAAAAATATTGGTTATTGCCTTT GATTATTACTTTGGTTTTGTTAGGAGCTTTGATTATTTTAAGCCAGTCTTCTGTAATTGCTCCATTCATTTATACTTTGT TTTAA
Upstream 100 bases:
>100_bases TAAAAAAGACCCTATGGATCGACAATTTCATACTGAAATATCAAGTTATCGGGTAATGAGTCAATTAAAAAGTAAAGAGA GTATGGAGCGACCTTTTTAA
Downstream 100 bases:
>100_bases GTGAAATTCTAAGAATATTCAGTATTAGCTGTCAGTTAATATCAATAAGACTCCTCCCTTGAATATTTATCCCTTGCATT ATATTATCAAAAACTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MFEGILDFLKDLWGFMRERKKYWLLPLIITLVLLGALIILSQSSVIAPFIYTLF
Sequences:
>Translated_54_residues MFEGILDFLKDLWGFMRERKKYWLLPLIITLVLLGALIILSQSSVIAPFIYTLF >Mature_54_residues MFEGILDFLKDLWGFMRERKKYWLLPLIITLVLLGALIILSQSSVIAPFIYTLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6348; Mature: 6348
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEGILDFLKDLWGFMRERKKYWLLPLIITLVLLGALIILSQSSVIAPFIYTLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC >Mature Secondary Structure MFEGILDFLKDLWGFMRERKKYWLLPLIITLVLLGALIILSQSSVIAPFIYTLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA