Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475364

Identifier: 113475364

GI number: 113475364

Start: 2561721

End: 2562938

Strand: Reverse

Name: 113475364

Synonym: Tery_1681

Alternate gene names: NA

Gene position: 2562938-2561721 (Counterclockwise)

Preceding gene: 113475365

Following gene: 113475363

Centisome position: 33.07

GC content: 32.27

Gene sequence:

>1218_bases
ATGAAAAAACTGAATAATTTACTCATAAATATTGGATTAATATTTGTAGCCTTAATAACTGGTATTTTGGCAGGAGAAAT
AGGATTAAGGGTAGCAAAAATAGAAGGATTGAAAAAAGCCAACAATAACGAACCCCACAGACCTACCATATTTCATACTC
ATGATCCTCATCGTGGTTGGGCATTACAACCGGGTTTCACTGCTTGGTGGCGAGAGGAGGGGGAAGCTTATATAGAAATT
AATAGCGATGGTTTAAGAGACCGCGAATATAGTAAAATTAAGCCAAAAAATACATTAAGAATTGCTATATTAGGAGATTC
TTTTGCTGAAGCGGTTCAAGTACCAATAGAGAAAACTTTTTGGTCAATAATTGAACAGAAATTGACAAAATGTGACTCTA
TTGCTAATAGAAAAGTTGAGGTAATTAATTTTGGGGTTCATGGTTATAGCACCTTGCAAGAACTGTTGACTTTACGTCAT
CAGGTTTGGGATTATAATCCAGATATTATATTGTTAGCTTTTTTTATAGGAAATGATATTATTAATAACTCAAAAAAACT
GGAGTATAGTCAATATAGACCATTTCTTATATATGAAAATGGAGAGTTGGTTGTCGATATGTCTTTTCAGGATTTAATTC
CAGCTCTAAGTAATCGCTATGTTGTTTCATTTATAGACAAAATACCTGGTTGGCTGGTAAATAATTCCAGAATCTTGCAA
GTAGTAAAAAAAGTAGATTTGAATCTAAAGAAAAAAAAATTAGACGCATATTTTATGGGTTTAGTACCGTATAATTTTCA
GCCACCAATCAATAATAATTGGCATCAAGCATGGGAAATTACAGAAGAATTAATCACATTAATAGCAGCAGAGGTGAGAG
AAAGAGAAAAAGATTTTTTGGCAGTATTAGTAGGAGATCCAAAACAGGTACATTACGACCAACCATATCTACAAAAAACT
TTTATGAAACAATACAATATTAATGATATGTTGTATCCCAATAAAAGAATAGAAGCTCTGGGCGATCGCTTAGGTTTTCC
AGTATTAGATTTAGTAGTACCTTTTCGAGATTATGCTGTGGAAAATCAAGCTTGTTTACACGGTTTTGAAAATACATCAT
TATGTATTGGGCATTGGAACATAGAAGGGCATCAATTAGCAGGAGAAATTATTACTAATAACCTCTGCAAACAGTTCAAA
TTTAATTATAATCAATAA

Upstream 100 bases:

>100_bases
ATAAAGTAAATCATTTTTTTTTCCATAAATTTCTACTCTCCAGTAACTTAATTTGTCCTCAATATGAAAAATAATTTCTT
GCTTAGTAAACCTTTATAAA

Downstream 100 bases:

>100_bases
TGAAAAAGCTACATAATTTAGCCATCAATTTAGGATTAATATTAGGTACATTAATATTTACTTTAACAGTAGGTGAAATA
GGATTAAGAATAGCAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKKLNNLLINIGLIFVALITGILAGEIGLRVAKIEGLKKANNNEPHRPTIFHTHDPHRGWALQPGFTAWWREEGEAYIEI
NSDGLRDREYSKIKPKNTLRIAILGDSFAEAVQVPIEKTFWSIIEQKLTKCDSIANRKVEVINFGVHGYSTLQELLTLRH
QVWDYNPDIILLAFFIGNDIINNSKKLEYSQYRPFLIYENGELVVDMSFQDLIPALSNRYVVSFIDKIPGWLVNNSRILQ
VVKKVDLNLKKKKLDAYFMGLVPYNFQPPINNNWHQAWEITEELITLIAAEVREREKDFLAVLVGDPKQVHYDQPYLQKT
FMKQYNINDMLYPNKRIEALGDRLGFPVLDLVVPFRDYAVENQACLHGFENTSLCIGHWNIEGHQLAGEIITNNLCKQFK
FNYNQ

Sequences:

>Translated_405_residues
MKKLNNLLINIGLIFVALITGILAGEIGLRVAKIEGLKKANNNEPHRPTIFHTHDPHRGWALQPGFTAWWREEGEAYIEI
NSDGLRDREYSKIKPKNTLRIAILGDSFAEAVQVPIEKTFWSIIEQKLTKCDSIANRKVEVINFGVHGYSTLQELLTLRH
QVWDYNPDIILLAFFIGNDIINNSKKLEYSQYRPFLIYENGELVVDMSFQDLIPALSNRYVVSFIDKIPGWLVNNSRILQ
VVKKVDLNLKKKKLDAYFMGLVPYNFQPPINNNWHQAWEITEELITLIAAEVREREKDFLAVLVGDPKQVHYDQPYLQKT
FMKQYNINDMLYPNKRIEALGDRLGFPVLDLVVPFRDYAVENQACLHGFENTSLCIGHWNIEGHQLAGEIITNNLCKQFK
FNYNQ
>Mature_405_residues
MKKLNNLLINIGLIFVALITGILAGEIGLRVAKIEGLKKANNNEPHRPTIFHTHDPHRGWALQPGFTAWWREEGEAYIEI
NSDGLRDREYSKIKPKNTLRIAILGDSFAEAVQVPIEKTFWSIIEQKLTKCDSIANRKVEVINFGVHGYSTLQELLTLRH
QVWDYNPDIILLAFFIGNDIINNSKKLEYSQYRPFLIYENGELVVDMSFQDLIPALSNRYVVSFIDKIPGWLVNNSRILQ
VVKKVDLNLKKKKLDAYFMGLVPYNFQPPINNNWHQAWEITEELITLIAAEVREREKDFLAVLVGDPKQVHYDQPYLQKT
FMKQYNINDMLYPNKRIEALGDRLGFPVLDLVVPFRDYAVENQACLHGFENTSLCIGHWNIEGHQLAGEIITNNLCKQFK
FNYNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46859; Mature: 46859

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNNLLINIGLIFVALITGILAGEIGLRVAKIEGLKKANNNEPHRPTIFHTHDPHRGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHCHHHCCCCCCCCCEEEECCCCCCCC
ALQPGFTAWWREEGEAYIEINSDGLRDREYSKIKPKNTLRIAILGDSFAEAVQVPIEKTF
EECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHH
WSIIEQKLTKCDSIANRKVEVINFGVHGYSTLQELLTLRHQVWDYNPDIILLAFFIGNDI
HHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCHH
INNSKKLEYSQYRPFLIYENGELVVDMSFQDLIPALSNRYVVSFIDKIPGWLVNNSRILQ
HCCCCCCCHHCCCCEEEEECCCEEEECCHHHHHHHHCCCHHHHHHHHCCCEEECCHHHHH
VVKKVDLNLKKKKLDAYFMGLVPYNFQPPINNNWHQAWEITEELITLIAAEVREREKDFL
HHHHHCCCCHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
AVLVGDPKQVHYDQPYLQKTFMKQYNINDMLYPNKRIEALGDRLGFPVLDLVVPFRDYAV
EEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHC
ENQACLHGFENTSLCIGHWNIEGHQLAGEIITNNLCKQFKFNYNQ
CCHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKLNNLLINIGLIFVALITGILAGEIGLRVAKIEGLKKANNNEPHRPTIFHTHDPHRGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHCHHHCCCCCCCCCEEEECCCCCCCC
ALQPGFTAWWREEGEAYIEINSDGLRDREYSKIKPKNTLRIAILGDSFAEAVQVPIEKTF
EECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHH
WSIIEQKLTKCDSIANRKVEVINFGVHGYSTLQELLTLRHQVWDYNPDIILLAFFIGNDI
HHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCHH
INNSKKLEYSQYRPFLIYENGELVVDMSFQDLIPALSNRYVVSFIDKIPGWLVNNSRILQ
HCCCCCCCHHCCCCEEEEECCCEEEECCHHHHHHHHCCCHHHHHHHHCCCEEECCHHHHH
VVKKVDLNLKKKKLDAYFMGLVPYNFQPPINNNWHQAWEITEELITLIAAEVREREKDFL
HHHHHCCCCHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
AVLVGDPKQVHYDQPYLQKTFMKQYNINDMLYPNKRIEALGDRLGFPVLDLVVPFRDYAV
EEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHC
ENQACLHGFENTSLCIGHWNIEGHQLAGEIITNNLCKQFKFNYNQ
CCHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA