Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475358

Identifier: 113475358

GI number: 113475358

Start: 2551876

End: 2552943

Strand: Direct

Name: 113475358

Synonym: Tery_1675

Alternate gene names: NA

Gene position: 2551876-2552943 (Clockwise)

Preceding gene: 113475355

Following gene: 113475368

Centisome position: 32.93

GC content: 29.78

Gene sequence:

>1068_bases
ATGATGAAAAAGATTTTTTCTCTCCTCCGTCAAACAGTAATTATCTCTTTAATAACATTTGGATTCACAGAAGTTGTATT
CAGAATTTACCACAAAATTAATCCTTCATTTATGTTTTATGACCCCTCATCTTATAATCGCTGGCGAGGAAAACCCTTGT
CTACAGATTATGATTTTCAGTTAAATTCTAGGGGATTTAAAGATGTAGAATTTACCAAAGAAAAAGCAGAAGGTACATAT
AGAATTATTGGTATAGGTGATTCTTTTGCCTATGGAGGTATTCCCTACAAACATAATTTTTTAACTCTATTGGAGTCTAA
ACTAAATCAGGATAGTCAGCAATCTATAGAATTAATTAATATGGGAATAATTGCTATTGGACCGAAAGATTATTTATCCC
TATTTGTCAATGAAGGATTAGAGTTAAATCCTGATATGCTTTTGTTATCTTTTTATATTGGTAATGACTTTTCTGATAAC
TATAAATCAAAACAAGATAGGAAATTACTTACAGTTCAAAGTTCTTATGTTTTATCTTTCTTTGATTTTATGATTAAGGT
GAATAGTAAGTTTGAAGGGAACCTCTATCATCATGGTATTGAATATCGAGAAGACTTACCTACTGTACCAGATGACTTTC
ATTTACAAGAGGCTAAAAATAGAAGTTATATTTTTATCAAAAATCTTGAAAAAACAGATTTTCTAGAACATTTTAATGAT
GCTTTTAGCGACTTATTAAAAATCAAGGAAATCTGCGATCGCCAAAATATTAATTTAGTCGTAGTCTTAATGCCTGATGA
AGTACAAGTCATTAAACCACTCAGAGAAAAAGTAATTACTAATTACAATTTTTCTCCAGAACAATTTGATTTCCGACAAC
CTAATAAATTACTATCTCAAGAACTGAATAAATACAATATATCTCATCTCGATCTTGTCGAAGAATTTGTTAATACTGGT
TCCGAAACTGTTCTCTACAAACCCAATGATATTCATTGGAATATTGCTGGTAATAAATTAGCTGCAGAAGTAATATATAA
GTATCTCTCTGGGAAAAAATTTCCCTAG

Upstream 100 bases:

>100_bases
GCTAACAGTTATATGTTATATTAATCTCTTACTGATTAGTAATCTAGATTCACTTTGCTTAAATCAAGCAAAAATATTCA
TCTCGCAAAACTAAAACTTA

Downstream 100 bases:

>100_bases
TTTTCAGTAGATTATTTTATTCATTTTTACTATCTCCTAATTGATTTTCATTGGCAGTAAGTGTAGTAAAAATTGAATTG
GCTATAAAATCTGACAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQLNSRGFKDVEFTKEKAEGTY
RIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELINMGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDN
YKSKQDRKLLTVQSSYVLSFFDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND
AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQELNKYNISHLDLVEEFVNTG
SETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP

Sequences:

>Translated_355_residues
MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQLNSRGFKDVEFTKEKAEGTY
RIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELINMGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDN
YKSKQDRKLLTVQSSYVLSFFDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND
AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQELNKYNISHLDLVEEFVNTG
SETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP
>Mature_355_residues
MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQLNSRGFKDVEFTKEKAEGTY
RIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELINMGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDN
YKSKQDRKLLTVQSSYVLSFFDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND
AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQELNKYNISHLDLVEEFVNTG
SETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41513; Mature: 41513

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEE
LNSRGFKDVEFTKEKAEGTYRIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELIN
ECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHE
MGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDNYKSKQDRKLLTVQSSYVLSF
ECEEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHH
FDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND
HHHHHHCCCCCCCCCEECCCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHH
AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQ
HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ELNKYNISHLDLVEEFVNTGSETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP
HHHHCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMKKIFSLLRQTVIISLITFGFTEVVFRIYHKINPSFMFYDPSSYNRWRGKPLSTDYDFQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEE
LNSRGFKDVEFTKEKAEGTYRIIGIGDSFAYGGIPYKHNFLTLLESKLNQDSQQSIELIN
ECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHE
MGIIAIGPKDYLSLFVNEGLELNPDMLLLSFYIGNDFSDNYKSKQDRKLLTVQSSYVLSF
ECEEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHH
FDFMIKVNSKFEGNLYHHGIEYREDLPTVPDDFHLQEAKNRSYIFIKNLEKTDFLEHFND
HHHHHHCCCCCCCCCEECCCCHHHCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHH
AFSDLLKIKEICDRQNINLVVVLMPDEVQVIKPLREKVITNYNFSPEQFDFRQPNKLLSQ
HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ELNKYNISHLDLVEEFVNTGSETVLYKPNDIHWNIAGNKLAAEVIYKYLSGKKFP
HHHHCCCHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA