Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475311

Identifier: 113475311

GI number: 113475311

Start: 2473654

End: 2474316

Strand: Direct

Name: 113475311

Synonym: Tery_1620

Alternate gene names: NA

Gene position: 2473654-2474316 (Clockwise)

Preceding gene: 113475310

Following gene: 113475315

Centisome position: 31.92

GC content: 39.52

Gene sequence:

>663_bases
ATGAAATTGGTTTATTTTTTAGCGGGAGTAGCATTGTTTATAACAGTGCTATTTATACCTAACCCAATGGGAGAATGGGA
TAGAATACCTATTGTTGAATCAATAGTCGCGGATAGTGGAGTAGCTAATGCAGTTTCTGGCATCATTTTTAGAAATCGAC
TTTATGACACGGTTTTTGAGGTGATAGTATTTACGATAGCTATCTTGGGTGTTCGTTTTTTATTGTCAGACGAAGAACCT
ACCGATAATTTTTATAGATTAAGCGATCCCACATCCAGAGTTTTAGCACGTTTAGGAGCGACTATTGCGGCGATGGTGAG
TATTGAGTTATCAATTCGGGGGCATCTGAGTCCGGGGGGTGGTTTTGCTGCAGGGATAGCAGGAGGAACTGCTATTGGTT
TAGTTGCTATGACTTCATCACCGGATAAGATGGAAAAGATATATCAGAGATGGAATGCTGCTATCTGGGAAAAAGTTTCA
GTTTTAGTATTCATAATATTGGCAGGGATAACTATGATGGGATGGGAATTACCTCAAGGAACATTAGGAGATTTATTTAG
TGGAGGAATTGTTCCGATACTGAATTTTTTGGTGGCTATAAAAGTGGCATTGGGTTCGTGGGCGGTTATTTTATTGTTTA
TTCGTTATCGGGGGTTGTTGTGA

Upstream 100 bases:

>100_bases
CTAGAGTGTATCGTCTATTTGAAATTATGGAAAAGGAACTAACTTTATCAGAAACAACTGTGAGATATATAAATGTCAGT
AACTTGGAGGAAAAAGATTA

Downstream 100 bases:

>100_bases
GGGTGTGAGGTGGATGGAGTGATGGGATGATGGGGCGGTAGCATATAGTTTTTATAGTTTGATGGTTATAGTCATAAAAA
TACTAATAATTTTGATTTTT

Product: putative monovalent cation/H+ antiporter subunit B

Products: NA

Alternate protein names: Na+/H+ Antiporter MnhB Subunit-Related Protein; Na+/H+ Antiporter Family Domain Protein; Na+ Antiporter MnhB Subunit-Related Protein; Transporter CationProton Antiporter Family

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFEVIVFTIAILGVRFLLSDEEP
TDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGGGFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVS
VLVFIILAGITMMGWELPQGTLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL

Sequences:

>Translated_220_residues
MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFEVIVFTIAILGVRFLLSDEEP
TDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGGGFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVS
VLVFIILAGITMMGWELPQGTLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL
>Mature_220_residues
MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFEVIVFTIAILGVRFLLSDEEP
TDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGGGFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVS
VLVFIILAGITMMGWELPQGTLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL

Specific function: Unknown

COG id: COG2111

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23822; Mature: 23822

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFE
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VIVFTIAILGVRFLLSDEEPTDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGG
HHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC
GFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVSVLVFIILAGITMMGWELPQG
CEEHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLVYFLAGVALFITVLFIPNPMGEWDRIPIVESIVADSGVANAVSGIIFRNRLYDTVFE
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VIVFTIAILGVRFLLSDEEPTDNFYRLSDPTSRVLARLGATIAAMVSIELSIRGHLSPGG
HHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC
GFAAGIAGGTAIGLVAMTSSPDKMEKIYQRWNAAIWEKVSVLVFIILAGITMMGWELPQG
CEEHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TLGDLFSGGIVPILNFLVAIKVALGSWAVILLFIRYRGLL
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA