Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475267

Identifier: 113475267

GI number: 113475267

Start: 2409951

End: 2410151

Strand: Reverse

Name: 113475267

Synonym: Tery_1575

Alternate gene names: NA

Gene position: 2410151-2409951 (Counterclockwise)

Preceding gene: 113475268

Following gene: 113475266

Centisome position: 31.1

GC content: 31.34

Gene sequence:

>201_bases
TTGAATTCAGAAATTAAAAAGTATCCATCTTGTTCTTTACATCAAGATGTTAGTGAATATGTGGCTGATTTACAATTTCA
CATGACTTTACATGCTCGTAATTTAGTTCCTTCTCTTAATCAAATAAAAGATGGTCGTGAGCAAATGTTGCAACAAACTC
AAGCTCATTTTGAAAAGTTGATTTCTAGACAGCCTCTTTAA

Upstream 100 bases:

>100_bases
ATATTAAGCTTCATTGCTAAACTTCAACAGAGGAAGAATTTCTATGGTACTTTTTGTGATCATAAACAAACTCAAATAAT
TTAGGGGGGGGGATAAAACT

Downstream 100 bases:

>100_bases
TTATTTTTATACTTATTGATTTTTCTGTAAAAACCCAGTTTTGACTAAATTAATTGGGTTTTTTAGTTTGTTTGAACAGT
TCAACAACTTTACATTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKLISRQPL

Sequences:

>Translated_66_residues
MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKLISRQPL
>Mature_66_residues
MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKLISRQPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7723; Mature: 7723

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ISRQPL
HHCCCC
>Mature Secondary Structure
MNSEIKKYPSCSLHQDVSEYVADLQFHMTLHARNLVPSLNQIKDGREQMLQQTQAHFEKL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ISRQPL
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA