Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475259

Identifier: 113475259

GI number: 113475259

Start: 2392917

End: 2393282

Strand: Reverse

Name: 113475259

Synonym: Tery_1567

Alternate gene names: NA

Gene position: 2393282-2392917 (Counterclockwise)

Preceding gene: 113475261

Following gene: 113475258

Centisome position: 30.88

GC content: 35.52

Gene sequence:

>366_bases
ATGACCCTAGCCACAGAGAAAAAGAACCTATCTAGTGATAAATCTTTGAATGCGATAAAAAATTTCGCGGAAAGATATGC
AAAAAAAACAAATACTTATTTTTGTATAGATCCTTCCGTTACTGCTGTAGTAATTGAGGGATTAGCTAAACATAAAGAAG
ATTTGGGCGCTCCCTTGTGCCCATGTCGTCATTATGAAGATAAACAAGCAGAAGTCAAAGCTACTTATTGGAATTGTCCT
TGTGTACCAATGCGGGAGCGTAAAGAATGTCATTGTATGTTGTTTTTAACGCCAGATAATGATTTTGCTGGTGAACAACA
AGAAATTACTCAAGAAGATCTAGAGTCAACTAGAAAAAATATGTAG

Upstream 100 bases:

>100_bases
GTAGATAATATGAGAAACTTGTAATTTAATTGACTTTAAAAATAGCATTATGTAGTAAAATTAACAGAACGAACAAAGAT
CACCATAACAAACAAATATT

Downstream 100 bases:

>100_bases
GTTGAAATTTTGAAGGAAGAAAGAAGAAAGTTAATCAACTTAGAAGCTATAGCTTAGAAGCTACAAGTCAAAATTTATTT
TGATCAAGGGGATTTTGGGC

Product: ferredoxin thioredoxin reductase subunit beta

Products: NA

Alternate protein names: Ferredoxin Thioredoxin Reductase Beta Chain; Ferredoxin Thioredoxin Reductase Catalytic Beta Chain; Ferredoxin-Thioredoxin Reductase Catalytic Subunit; Ferredoxin-Thioredoxin Reductase Catalytic Beta Subunit; Ferredoxin Thioredoxin Reductase Subunit Beta; Ferredoxin-Thioredoxin Reductase Catalytic Beta Chain; Ferredoxin Thioredoxin Reductase Catalytic Chain

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLCPCRHYEDKQAEVKATYWNCP
CVPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKNM

Sequences:

>Translated_121_residues
MTLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLCPCRHYEDKQAEVKATYWNCP
CVPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKNM
>Mature_120_residues
TLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLCPCRHYEDKQAEVKATYWNCPC
VPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKNM

Specific function: Unknown

COG id: COG4802

COG function: function code C; Ferredoxin-thioredoxin reductase, catalytic subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13866; Mature: 13735

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLC
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCC
PCRHYEDKQAEVKATYWNCPCVPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKN
CCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
M
C
>Mature Secondary Structure 
TLATEKKNLSSDKSLNAIKNFAERYAKKTNTYFCIDPSVTAVVIEGLAKHKEDLGAPLC
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCC
PCRHYEDKQAEVKATYWNCPCVPMRERKECHCMLFLTPDNDFAGEQQEITQEDLESTRKN
CCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA