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The map label for this gene is smf [C]

Identifier: 113475262

GI number: 113475262

Start: 2399103

End: 2400650

Strand: Reverse

Name: smf [C]

Synonym: Tery_1570

Alternate gene names: 113475262

Gene position: 2400650-2399103 (Counterclockwise)

Preceding gene: 113475263

Following gene: 113475261

Centisome position: 30.98

GC content: 30.49

Gene sequence:

>1548_bases
ATGCTTAATCATGTTTTATCTTCAGATGCACAAGTGACTTTATTATTATGTGCTAGTTTTGGTCAAAATAGAAATATACA
GCCACAACCTTTAACTCTAATTGAGTATAATATAGTTGCTAATTTTTTAATTAAAAATCAAGTTAGACCAGGATATTTAC
TAAGTAAAAATGGATTAGATATACTACCAAAAATTAATGATAAAAAATTAAACTATGAGCGGTTAGTGGCTCTATTGGAA
AGAGGTGGAATTTTAGCTATTACTCTGGAAAAGTGGGTGAACCAAGGTTTATGGGTACTTACAAGAAGTGACCAAAATTA
TCCTATAAAATGGAAACAGAATCTGCAATATTTGGCTCCTGTAATTATTTATGGTGTAGGAAATATAGAATTATTGGAAA
AGGGTGGATTAGCTATAGTGGGTTCTCGTGATATTAATGAAGAAGAAGTTGAATATACAAAAAAAGTTGGAAAAGTTTGT
GCGTCTGAAGGTATTAATGTAATTTCTGGGGGTGCAAAAGGGATAGATCAAGAGGCAATGTTAGGAACTTTAGAGTTTGG
TGGTACTGCTGTTGGAGTTTTGGCAAATAGTTTAAATAAAGCGTCTGTTTCTAGAAAATATCGTGACAGTATTAGGGCTG
ATAAACTAACTTTAATTTCTACTTATGACCCTGATGCGGGATTTAGTGTTGGTAATGCTATGGGTCGGAATAAATATATT
TATGCTTTATCTGATTATGCTTTAGTTGTAAGTAGTAGTTTCAATAAGGGTGGTACTTGGGCTGGGGCTACAGAGGTGTT
GAAGAAATATAAGAAAATACCTGTATTTGTGAAAGTTCAAGGAAAGGTAAAAGAGGGAAATAAAGCTCTTTTGGATAAAG
GAGCAAGGTCTTTTCCTTTTGATCCATGGGATGGTAATTTAAAGGATTTTTTGGTGGGTTCAAAATGCGATTTAAAGTTG
TCTGAAAATATTTCGTTGATAGAATTAGAAACTCCAGTTAATATATCTGCAAAAACTGCTAATTTAAATGTTGAAACTAA
GTCTAATTTATCTATTTATGAAGGAACTAATCCAAGTATTTATGAGAAAGTTTTACCTATTATACTGAAAAATTTAATTC
GGCCACAAAAGGCAAAATCTTTAAGTAAAATATTAGATGTGAGAGTTGGTCAGTTACGTAATTGGTTAAGTCAAGCCTGT
GATGAAGAAAAAATAGTTAAAGATGAAAAAACAGCAATATATAGAATTGTTGCTGAAACTAAACAATATCAAAATTATCA
AATTTCAACAGAGGAATTAAATGTTTATGAAATGGTGTTGCCAATTCTACTAGATAATTTAAATAAACCACAAAAAATTC
AAGATTTAGCTAAAATTTTAAATGTAAATAAAAGCCAATTAGAAGATTGGTTAAAAATAGCTAAAACAGAAGGAAAAATA
ATGTTAGAAAAGAATTCTAATGTTTATGTGATTTACCAAGATATCAAACAGTTATCTCTTTTTGATAGAGTGGAAGATGA
AGATGATGAGGAAGGGTTAGATTGGTAA

Upstream 100 bases:

>100_bases
CTTTTTTTTGAATATTGTTATGTGAATTTATTTCCTTTCAACTATGTTTTTTTGCTAAATAATAAAATAGAGATACCTGC
TCAAAAATTATCCAATAAAA

Downstream 100 bases:

>100_bases
AATTATTTTTAAACAATATCAATAGGAATGATTTACCATTACTAGAAACCGGGTTTATTGCTTTGATTATTGTTTTTGAC
TTTTCTTGAAATGTCTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MLNHVLSSDAQVTLLLCASFGQNRNIQPQPLTLIEYNIVANFLIKNQVRPGYLLSKNGLDILPKINDKKLNYERLVALLE
RGGILAITLEKWVNQGLWVLTRSDQNYPIKWKQNLQYLAPVIIYGVGNIELLEKGGLAIVGSRDINEEEVEYTKKVGKVC
ASEGINVISGGAKGIDQEAMLGTLEFGGTAVGVLANSLNKASVSRKYRDSIRADKLTLISTYDPDAGFSVGNAMGRNKYI
YALSDYALVVSSSFNKGGTWAGATEVLKKYKKIPVFVKVQGKVKEGNKALLDKGARSFPFDPWDGNLKDFLVGSKCDLKL
SENISLIELETPVNISAKTANLNVETKSNLSIYEGTNPSIYEKVLPIILKNLIRPQKAKSLSKILDVRVGQLRNWLSQAC
DEEKIVKDEKTAIYRIVAETKQYQNYQISTEELNVYEMVLPILLDNLNKPQKIQDLAKILNVNKSQLEDWLKIAKTEGKI
MLEKNSNVYVIYQDIKQLSLFDRVEDEDDEEGLDW

Sequences:

>Translated_515_residues
MLNHVLSSDAQVTLLLCASFGQNRNIQPQPLTLIEYNIVANFLIKNQVRPGYLLSKNGLDILPKINDKKLNYERLVALLE
RGGILAITLEKWVNQGLWVLTRSDQNYPIKWKQNLQYLAPVIIYGVGNIELLEKGGLAIVGSRDINEEEVEYTKKVGKVC
ASEGINVISGGAKGIDQEAMLGTLEFGGTAVGVLANSLNKASVSRKYRDSIRADKLTLISTYDPDAGFSVGNAMGRNKYI
YALSDYALVVSSSFNKGGTWAGATEVLKKYKKIPVFVKVQGKVKEGNKALLDKGARSFPFDPWDGNLKDFLVGSKCDLKL
SENISLIELETPVNISAKTANLNVETKSNLSIYEGTNPSIYEKVLPIILKNLIRPQKAKSLSKILDVRVGQLRNWLSQAC
DEEKIVKDEKTAIYRIVAETKQYQNYQISTEELNVYEMVLPILLDNLNKPQKIQDLAKILNVNKSQLEDWLKIAKTEGKI
MLEKNSNVYVIYQDIKQLSLFDRVEDEDDEEGLDW
>Mature_515_residues
MLNHVLSSDAQVTLLLCASFGQNRNIQPQPLTLIEYNIVANFLIKNQVRPGYLLSKNGLDILPKINDKKLNYERLVALLE
RGGILAITLEKWVNQGLWVLTRSDQNYPIKWKQNLQYLAPVIIYGVGNIELLEKGGLAIVGSRDINEEEVEYTKKVGKVC
ASEGINVISGGAKGIDQEAMLGTLEFGGTAVGVLANSLNKASVSRKYRDSIRADKLTLISTYDPDAGFSVGNAMGRNKYI
YALSDYALVVSSSFNKGGTWAGATEVLKKYKKIPVFVKVQGKVKEGNKALLDKGARSFPFDPWDGNLKDFLVGSKCDLKL
SENISLIELETPVNISAKTANLNVETKSNLSIYEGTNPSIYEKVLPIILKNLIRPQKAKSLSKILDVRVGQLRNWLSQAC
DEEKIVKDEKTAIYRIVAETKQYQNYQISTEELNVYEMVLPILLDNLNKPQKIQDLAKILNVNKSQLEDWLKIAKTEGKI
MLEKNSNVYVIYQDIKQLSLFDRVEDEDDEEGLDW

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57642; Mature: 57642

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHVLSSDAQVTLLLCASFGQNRNIQPQPLTLIEYNIVANFLIKNQVRPGYLLSKNGLD
CCCCHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEEECCCCCE
ILPKINDKKLNYERLVALLERGGILAITLEKWVNQGLWVLTRSDQNYPIKWKQNLQYLAP
ECCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCEEEEEECCCCCCEEHHCCHHHHCC
VIIYGVGNIELLEKGGLAIVGSRDINEEEVEYTKKVGKVCASEGINVISGGAKGIDQEAM
EEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHH
LGTLEFGGTAVGVLANSLNKASVSRKYRDSIRADKLTLISTYDPDAGFSVGNAMGRNKYI
EEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCCCEE
YALSDYALVVSSSFNKGGTWAGATEVLKKYKKIPVFVKVQGKVKEGNKALLDKGARSFPF
EEEECEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCC
DPWDGNLKDFLVGSKCDLKLSENISLIELETPVNISAKTANLNVETKSNLSIYEGTNPSI
CCCCCCHHHHEECCCCCEEECCCEEEEEECCCCCEEEEEEEEEEEECCCEEEEECCCCHH
YEKVLPIILKNLIRPQKAKSLSKILDVRVGQLRNWLSQACDEEKIVKDEKTAIYRIVAET
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHH
KQYQNYQISTEELNVYEMVLPILLDNLNKPQKIQDLAKILNVNKSQLEDWLKIAKTEGKI
HHHCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
MLEKNSNVYVIYQDIKQLSLFDRVEDEDDEEGLDW
EEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLNHVLSSDAQVTLLLCASFGQNRNIQPQPLTLIEYNIVANFLIKNQVRPGYLLSKNGLD
CCCCHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEEECCCCCE
ILPKINDKKLNYERLVALLERGGILAITLEKWVNQGLWVLTRSDQNYPIKWKQNLQYLAP
ECCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCEEEEEECCCCCCEEHHCCHHHHCC
VIIYGVGNIELLEKGGLAIVGSRDINEEEVEYTKKVGKVCASEGINVISGGAKGIDQEAM
EEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHH
LGTLEFGGTAVGVLANSLNKASVSRKYRDSIRADKLTLISTYDPDAGFSVGNAMGRNKYI
EEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCCCEE
YALSDYALVVSSSFNKGGTWAGATEVLKKYKKIPVFVKVQGKVKEGNKALLDKGARSFPF
EEEECEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCC
DPWDGNLKDFLVGSKCDLKLSENISLIELETPVNISAKTANLNVETKSNLSIYEGTNPSI
CCCCCCHHHHEECCCCCEEECCCEEEEEECCCCCEEEEEEEEEEEECCCEEEEECCCCHH
YEKVLPIILKNLIRPQKAKSLSKILDVRVGQLRNWLSQACDEEKIVKDEKTAIYRIVAET
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHH
KQYQNYQISTEELNVYEMVLPILLDNLNKPQKIQDLAKILNVNKSQLEDWLKIAKTEGKI
HHHCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
MLEKNSNVYVIYQDIKQLSLFDRVEDEDDEEGLDW
EEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA