Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475136

Identifier: 113475136

GI number: 113475136

Start: 2160500

End: 2162746

Strand: Reverse

Name: 113475136

Synonym: Tery_1428

Alternate gene names: NA

Gene position: 2162746-2160500 (Counterclockwise)

Preceding gene: 113475137

Following gene: 113475135

Centisome position: 27.91

GC content: 33.47

Gene sequence:

>2247_bases
ATGGTTAAAACTATTGAGGCGGTTGTTAGAAAGCTATGGCTATCTCCGGAGAATGCCGTGGAAGAGGTGGTAAGATTTGA
GCGTCGTTTTGGAGAAGAAAATTTTAAGCTTGCTTGTCATTGTGGGTTGTTTTTGATTTTAACTCCTGAATTAGTTAATT
TAATTCGGATTAATTTTTTGGATGAGGAAAATATTCCTTGGATAGGAGAAAGTAATTTTTTGTTGTCTTCTTTATGTCGT
CCTTTACAAGAGGGAGTTTATGAGGTTGAGCCTTGTGTGAGGGAAGTTTTGTTGGAGGAATTGGAGGATAAATTTGGTTG
GCGACGACCTTTTGAATTGGCTGAATTTTTGTGGTTTTATTTGGATAAACAAGGGGAGAGAAAACCATCTGGAGAGTTAA
GAATGGTTCAAGAATGGATTGCTCAAGCTTATTTAGATCCCGATAGGACAATTCGGGAAATGGAGAGCTTTTTATCTGAA
AGTTTGCCGGAAGATAATCCGGTTTTGGGGTTAGCTGGTCAAGAAAAAATTCCTTATTTAGTGGAGATTTTGGCTCAACC
TTTGGAGCAGACTAATTTATGGAAAGAGTATCAAAATTTGGTGCTTAATTCTCATGTTTTGGCAAAGTTATTGGTTGATG
AAAAGGAGGGGTTAGGGGAGGAAATTGAGGAGTTAAAAGAAGAGTTTGGAGATGGGGAGGAGGTCAAATTAGGTAATGAG
AAGTTTTTCTTAATTCATCCTGTTATTAAAAAGTTTTTGGCAGAGTTTCCTCCAGAAAAAGGAATAGATTATATCTGTGA
AGCTAAATTACTAATTGTTGGAGAAGCTGGAGCTGGTAAAACAGCTTTAGCTAATAAAATTATCAACCCAAACTATCAAC
TCAAAGATGAAGATACAACCAAAGGAATTGAAGTTTATCAGTACAACTTTAAGACAAAAAACCAAAATGACTTTCAAATA
AATATTTGGGATTTTGGCGGACAAGAAATTTATCACACTACCCACCAATTTTTCTTAACAAAACGCTCTCTATATATCCT
TGTCGTTGATACTCGCAAAGAAGATACAGACTTTTATTATTGGCTCAATGTAGTAGAATTATTAAGCGATAATAGCCCCT
TATTAATTGTGAAAAATGAGAAACATGAACGGCAACGAGAAATTAATCAACGGGGATTGCAAGGGCAATTTACTAACATT
AAAGAAATCTTAGCTACCAACCTTGAAACTAATCGCGGTTTAGAAGAAATTATCAGAGAAATCGAACATCATATTAGTGA
ATTACCCCATATTGGCAGTAGTTTACCTAAAACTTGGAAACAAGTCCGGGAAATCTTAGAATTAGACTCCCGTAACTATA
TTAGTCTAGAAGAATATTTATCTATTTGTAAACAAAATGGCTTGACAAAATTGGAGTATAAATTACAGTTAAGTCGCTAT
TTACATGACTTAGGAATTTGTCTTCATTTTCAGGATAACCCACTGTTAAATAAAACAGTTATTCTCAAACCAGAATGGGG
AATAGCGGCAGTTTATAAAATCTTAGATAATCCGACAGTTTATAATAACTTCGGCAAATTCACCAAAGATGATTTAACCA
ATATCTGGAATGAAGAAAAATATGTGGATATGCGCGATGAACTACTCCAGTTAATGATTAGATTTAAACTATGTTATAAA
ATTCTTGGTAATTCTCAGACCTATATTGCCCCTCAACTTTTAACAGAAAATCAACCAGAATATGACTGGGATGAAAATAA
CAATTTGATTTTACGTTACACCTACAAATTTATGCCCAGAGGAATTATCACTCAGTTTATTGTAGATATGCACCGAGATA
TTGAACAACAGAAATATGTTTGGAAAAGGGGAGTTATTATCAAGCAAAATGAAACCAGAGCAGAGGTAATTGAATATTAC
GACAGAAGAGAAATAAAAATTAGGGTTTCTGGACGACAAAAACGGGCTTTAATGACTCTCGTAACTTACCTATTAGATAA
AATTCACAGTTCCTATAATAATCGACTCAAATATAATCACTTATTTCCTTGTACTTGTGCTGCTTGTAAAAATAGCCAGA
ATCCACATTTTTATAAACTTGAAAAATTAAAAGAATGGATTCGTAATGGTAGACTAAAAACTACCTGTGAGAATCATCCT
TATAATGAAGTTAATATAAAGAGTTTAATTGATAATGTAATAAATATAGATTTATTATCAAAACTTAGATATATGGTACG
CGATTAA

Upstream 100 bases:

>100_bases
ATTGCTACGTTTATTCCTATGTATTCTTTAAATCCACAAGGATTAAATGATTTGGTTAAAATATTGTTAGGATATCCTTT
TCCAATGGGAGTTAATTTGC

Downstream 100 bases:

>100_bases
ATATAGCAGCAGCTCGTCCTGTAGAAATGGGAGAAAACTACACTAATAATCTAGTCACTCGACTTATTTCAGAATTAAAA
CCTCGTTGTTTAGCAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Ras Family; Miro-Like Protein; Miro Domain-Containing Protein; Rab Family Protein; GTPase; Miro Domain Protein; ATPase Histidine Kinase- DNA Gyrase B- And; Miro-Like

Number of amino acids: Translated: 748; Mature: 748

Protein sequence:

>748_residues
MVKTIEAVVRKLWLSPENAVEEVVRFERRFGEENFKLACHCGLFLILTPELVNLIRINFLDEENIPWIGESNFLLSSLCR
PLQEGVYEVEPCVREVLLEELEDKFGWRRPFELAEFLWFYLDKQGERKPSGELRMVQEWIAQAYLDPDRTIREMESFLSE
SLPEDNPVLGLAGQEKIPYLVEILAQPLEQTNLWKEYQNLVLNSHVLAKLLVDEKEGLGEEIEELKEEFGDGEEVKLGNE
KFFLIHPVIKKFLAEFPPEKGIDYICEAKLLIVGEAGAGKTALANKIINPNYQLKDEDTTKGIEVYQYNFKTKNQNDFQI
NIWDFGGQEIYHTTHQFFLTKRSLYILVVDTRKEDTDFYYWLNVVELLSDNSPLLIVKNEKHERQREINQRGLQGQFTNI
KEILATNLETNRGLEEIIREIEHHISELPHIGSSLPKTWKQVREILELDSRNYISLEEYLSICKQNGLTKLEYKLQLSRY
LHDLGICLHFQDNPLLNKTVILKPEWGIAAVYKILDNPTVYNNFGKFTKDDLTNIWNEEKYVDMRDELLQLMIRFKLCYK
ILGNSQTYIAPQLLTENQPEYDWDENNNLILRYTYKFMPRGIITQFIVDMHRDIEQQKYVWKRGVIIKQNETRAEVIEYY
DRREIKIRVSGRQKRALMTLVTYLLDKIHSSYNNRLKYNHLFPCTCAACKNSQNPHFYKLEKLKEWIRNGRLKTTCENHP
YNEVNIKSLIDNVINIDLLSKLRYMVRD

Sequences:

>Translated_748_residues
MVKTIEAVVRKLWLSPENAVEEVVRFERRFGEENFKLACHCGLFLILTPELVNLIRINFLDEENIPWIGESNFLLSSLCR
PLQEGVYEVEPCVREVLLEELEDKFGWRRPFELAEFLWFYLDKQGERKPSGELRMVQEWIAQAYLDPDRTIREMESFLSE
SLPEDNPVLGLAGQEKIPYLVEILAQPLEQTNLWKEYQNLVLNSHVLAKLLVDEKEGLGEEIEELKEEFGDGEEVKLGNE
KFFLIHPVIKKFLAEFPPEKGIDYICEAKLLIVGEAGAGKTALANKIINPNYQLKDEDTTKGIEVYQYNFKTKNQNDFQI
NIWDFGGQEIYHTTHQFFLTKRSLYILVVDTRKEDTDFYYWLNVVELLSDNSPLLIVKNEKHERQREINQRGLQGQFTNI
KEILATNLETNRGLEEIIREIEHHISELPHIGSSLPKTWKQVREILELDSRNYISLEEYLSICKQNGLTKLEYKLQLSRY
LHDLGICLHFQDNPLLNKTVILKPEWGIAAVYKILDNPTVYNNFGKFTKDDLTNIWNEEKYVDMRDELLQLMIRFKLCYK
ILGNSQTYIAPQLLTENQPEYDWDENNNLILRYTYKFMPRGIITQFIVDMHRDIEQQKYVWKRGVIIKQNETRAEVIEYY
DRREIKIRVSGRQKRALMTLVTYLLDKIHSSYNNRLKYNHLFPCTCAACKNSQNPHFYKLEKLKEWIRNGRLKTTCENHP
YNEVNIKSLIDNVINIDLLSKLRYMVRD
>Mature_748_residues
MVKTIEAVVRKLWLSPENAVEEVVRFERRFGEENFKLACHCGLFLILTPELVNLIRINFLDEENIPWIGESNFLLSSLCR
PLQEGVYEVEPCVREVLLEELEDKFGWRRPFELAEFLWFYLDKQGERKPSGELRMVQEWIAQAYLDPDRTIREMESFLSE
SLPEDNPVLGLAGQEKIPYLVEILAQPLEQTNLWKEYQNLVLNSHVLAKLLVDEKEGLGEEIEELKEEFGDGEEVKLGNE
KFFLIHPVIKKFLAEFPPEKGIDYICEAKLLIVGEAGAGKTALANKIINPNYQLKDEDTTKGIEVYQYNFKTKNQNDFQI
NIWDFGGQEIYHTTHQFFLTKRSLYILVVDTRKEDTDFYYWLNVVELLSDNSPLLIVKNEKHERQREINQRGLQGQFTNI
KEILATNLETNRGLEEIIREIEHHISELPHIGSSLPKTWKQVREILELDSRNYISLEEYLSICKQNGLTKLEYKLQLSRY
LHDLGICLHFQDNPLLNKTVILKPEWGIAAVYKILDNPTVYNNFGKFTKDDLTNIWNEEKYVDMRDELLQLMIRFKLCYK
ILGNSQTYIAPQLLTENQPEYDWDENNNLILRYTYKFMPRGIITQFIVDMHRDIEQQKYVWKRGVIIKQNETRAEVIEYY
DRREIKIRVSGRQKRALMTLVTYLLDKIHSSYNNRLKYNHLFPCTCAACKNSQNPHFYKLEKLKEWIRNGRLKTTCENHP
YNEVNIKSLIDNVINIDLLSKLRYMVRD

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI171846278, Length=461, Percent_Identity=23.2104121475054, Blast_Score=93, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88380; Mature: 88380

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTIEAVVRKLWLSPENAVEEVVRFERRFGEENFKLACHCGLFLILTPELVNLIRINFL
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECHHHHHHHHEEEE
DEENIPWIGESNFLLSSLCRPLQEGVYEVEPCVREVLLEELEDKFGWRRPFELAEFLWFY
CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LDKQGERKPSGELRMVQEWIAQAYLDPDRTIREMESFLSESLPEDNPVLGLAGQEKIPYL
HCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHH
VEILAQPLEQTNLWKEYQNLVLNSHVLAKLLVDEKEGLGEEIEELKEEFGDGEEVKLGNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCC
KFFLIHPVIKKFLAEFPPEKGIDYICEAKLLIVGEAGAGKTALANKIINPNYQLKDEDTT
CEEEEHHHHHHHHHHCCCCCCCCCEECEEEEEEECCCCCHHHHHHHHCCCCCEECCCCCC
KGIEVYQYNFKTKNQNDFQINIWDFGGQEIYHTTHQFFLTKRSLYILVVDTRKEDTDFYY
CCEEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHEEECCEEEEEEECCCCCCHHHH
WLNVVELLSDNSPLLIVKNEKHERQREINQRGLQGQFTNIKEILATNLETNRGLEEIIRE
HHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
IEHHISELPHIGSSLPKTWKQVREILELDSRNYISLEEYLSICKQNGLTKLEYKLQLSRY
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH
LHDLGICLHFQDNPLLNKTVILKPEWGIAAVYKILDNPTVYNNFGKFTKDDLTNIWNEEK
HHHCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCCH
YVDMRDELLQLMIRFKLCYKILGNSQTYIAPQLLTENQPEYDWDENNNLILRYTYKFMPR
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHCCCCCCCCCCCCCCEEEEEEHHHCCH
GIITQFIVDMHRDIEQQKYVWKRGVIIKQNETRAEVIEYYDRREIKIRVSGRQKRALMTL
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH
VTYLLDKIHSSYNNRLKYNHLFPCTCAACKNSQNPHFYKLEKLKEWIRNGRLKTTCENHP
HHHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEECCCC
YNEVNIKSLIDNVINIDLLSKLRYMVRD
CCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKTIEAVVRKLWLSPENAVEEVVRFERRFGEENFKLACHCGLFLILTPELVNLIRINFL
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECHHHHHHHHEEEE
DEENIPWIGESNFLLSSLCRPLQEGVYEVEPCVREVLLEELEDKFGWRRPFELAEFLWFY
CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LDKQGERKPSGELRMVQEWIAQAYLDPDRTIREMESFLSESLPEDNPVLGLAGQEKIPYL
HCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHH
VEILAQPLEQTNLWKEYQNLVLNSHVLAKLLVDEKEGLGEEIEELKEEFGDGEEVKLGNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCC
KFFLIHPVIKKFLAEFPPEKGIDYICEAKLLIVGEAGAGKTALANKIINPNYQLKDEDTT
CEEEEHHHHHHHHHHCCCCCCCCCEECEEEEEEECCCCCHHHHHHHHCCCCCEECCCCCC
KGIEVYQYNFKTKNQNDFQINIWDFGGQEIYHTTHQFFLTKRSLYILVVDTRKEDTDFYY
CCEEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHEEECCEEEEEEECCCCCCHHHH
WLNVVELLSDNSPLLIVKNEKHERQREINQRGLQGQFTNIKEILATNLETNRGLEEIIRE
HHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
IEHHISELPHIGSSLPKTWKQVREILELDSRNYISLEEYLSICKQNGLTKLEYKLQLSRY
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH
LHDLGICLHFQDNPLLNKTVILKPEWGIAAVYKILDNPTVYNNFGKFTKDDLTNIWNEEK
HHHCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCCH
YVDMRDELLQLMIRFKLCYKILGNSQTYIAPQLLTENQPEYDWDENNNLILRYTYKFMPR
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHCCCCCCCCCCCCCCEEEEEEHHHCCH
GIITQFIVDMHRDIEQQKYVWKRGVIIKQNETRAEVIEYYDRREIKIRVSGRQKRALMTL
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH
VTYLLDKIHSSYNNRLKYNHLFPCTCAACKNSQNPHFYKLEKLKEWIRNGRLKTTCENHP
HHHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEECCCC
YNEVNIKSLIDNVINIDLLSKLRYMVRD
CCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA