Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475137

Identifier: 113475137

GI number: 113475137

Start: 2162739

End: 2163899

Strand: Reverse

Name: 113475137

Synonym: Tery_1429

Alternate gene names: NA

Gene position: 2163899-2162739 (Counterclockwise)

Preceding gene: 113475138

Following gene: 113475136

Centisome position: 27.92

GC content: 32.82

Gene sequence:

>1161_bases
ATGGTTGACTTTGAATTATTAATCGTTGAATTTGAAACTATTTTATTGCCTTTATTTAATAGGTTGAGGCAAAAGGATAT
TCCCGTGGGAATTTCTGAATATTTACTGGCGATTAAAATGATTCAATCTCGAGGGGCGTGGCAGGATATTGAACGTTTAA
AACGACTTTTATGTTTGTTATGGGTTAAGTCTTTAGAAGACCAATATATTTTTAATCAATTGTTTGAGGAGTTAGTTAGA
CCTGAGTTAGAAAAGCAATTACTAGAAGCTGATAAATCTCCATTGCCTAAAATTGATGAGGATTCTACTTCTCCTCCTCA
AAAGACTGAAAATTTAGATATTAATAGTAATCCTATTTCTCAAGTTTCATCTAAAGTTCAAAAGGAAAATAAACCTCAAC
CTAATCAACCAACTAATTCAATCCCAATTCGCGATTTTTCGAGAAAATCTCTGTCAGAAATAACCCCAATAAAACTGAGA
TTTAGACAAAGTTATAATTTGATTCCCCGTTTACCAATAACTCGCCGAGAAATGACTAGTATTTGGCGTAATTTAAGGTT
GTTAAAACGAGAGGGTGCGCCGGAAAATTTAGATGTTCAAGGAACAATTAATCTATTTTATAAAATGGGTTTTTTCTCTG
GTGTGGTTTTACAACCTTCTAGAAAAAATCAAGTTAAGTTGGTTTTGTTAATTGACTGTGAAGGTTCCATGTCTCCTTTT
AAATTGTTGATTGATACTTTACAGGAAAGTATTGAAAAAGTAGGGTTGTTAAATCAAAAGAATATTTTTTATTTTCACAA
TGTGCCGAGGGGTTATCTATTTACTAAACCTAATTTAACTAAGCCTTTGCCTATTGAGGAAATTTTATCTCAGGAAGTTG
GTAATAATAGTGTGGTTATTGTTAGTGATGGGGGGGCGGCACGGCGCACTTATGATAGTGAAAGATTCCATCAAACTAAG
GAATTTATACGGCAATTATCTGATAAAACTTATTTATATGGATGGTTAAACCCTGTTCCAGAATTTCAGTGGAGGATGAC
CACTGCTGAAGATATTGCTACGTTTATTCCTATGTATTCTTTAAATCCACAAGGATTAAATGATTTGGTTAAAATATTGT
TAGGATATCCTTTTCCAATGGGAGTTAATTTGCATGGTTAA

Upstream 100 bases:

>100_bases
TTGAGGTAAAAGAGCTTAGATTTGGTTGATTCGCGAAACTAAACACTAATAAAGCAACAAAATCCAATACCAAACCAGTA
GATAAGCTGAAAATTAATAA

Downstream 100 bases:

>100_bases
AACTATTGAGGCGGTTGTTAGAAAGCTATGGCTATCTCCGGAGAATGCCGTGGAAGAGGTGGTAAGATTTGAGCGTCGTT
TTGGAGAAGAAAATTTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: VWA Domain Containing CoxE-Like Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MVDFELLIVEFETILLPLFNRLRQKDIPVGISEYLLAIKMIQSRGAWQDIERLKRLLCLLWVKSLEDQYIFNQLFEELVR
PELEKQLLEADKSPLPKIDEDSTSPPQKTENLDINSNPISQVSSKVQKENKPQPNQPTNSIPIRDFSRKSLSEITPIKLR
FRQSYNLIPRLPITRREMTSIWRNLRLLKREGAPENLDVQGTINLFYKMGFFSGVVLQPSRKNQVKLVLLIDCEGSMSPF
KLLIDTLQESIEKVGLLNQKNIFYFHNVPRGYLFTKPNLTKPLPIEEILSQEVGNNSVVIVSDGGAARRTYDSERFHQTK
EFIRQLSDKTYLYGWLNPVPEFQWRMTTAEDIATFIPMYSLNPQGLNDLVKILLGYPFPMGVNLHG

Sequences:

>Translated_386_residues
MVDFELLIVEFETILLPLFNRLRQKDIPVGISEYLLAIKMIQSRGAWQDIERLKRLLCLLWVKSLEDQYIFNQLFEELVR
PELEKQLLEADKSPLPKIDEDSTSPPQKTENLDINSNPISQVSSKVQKENKPQPNQPTNSIPIRDFSRKSLSEITPIKLR
FRQSYNLIPRLPITRREMTSIWRNLRLLKREGAPENLDVQGTINLFYKMGFFSGVVLQPSRKNQVKLVLLIDCEGSMSPF
KLLIDTLQESIEKVGLLNQKNIFYFHNVPRGYLFTKPNLTKPLPIEEILSQEVGNNSVVIVSDGGAARRTYDSERFHQTK
EFIRQLSDKTYLYGWLNPVPEFQWRMTTAEDIATFIPMYSLNPQGLNDLVKILLGYPFPMGVNLHG
>Mature_386_residues
MVDFELLIVEFETILLPLFNRLRQKDIPVGISEYLLAIKMIQSRGAWQDIERLKRLLCLLWVKSLEDQYIFNQLFEELVR
PELEKQLLEADKSPLPKIDEDSTSPPQKTENLDINSNPISQVSSKVQKENKPQPNQPTNSIPIRDFSRKSLSEITPIKLR
FRQSYNLIPRLPITRREMTSIWRNLRLLKREGAPENLDVQGTINLFYKMGFFSGVVLQPSRKNQVKLVLLIDCEGSMSPF
KLLIDTLQESIEKVGLLNQKNIFYFHNVPRGYLFTKPNLTKPLPIEEILSQEVGNNSVVIVSDGGAARRTYDSERFHQTK
EFIRQLSDKTYLYGWLNPVPEFQWRMTTAEDIATFIPMYSLNPQGLNDLVKILLGYPFPMGVNLHG

Specific function: Unknown

COG id: COG3825

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44708; Mature: 44708

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDFELLIVEFETILLPLFNRLRQKDIPVGISEYLLAIKMIQSRGAWQDIERLKRLLCLL
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
WVKSLEDQYIFNQLFEELVRPELEKQLLEADKSPLPKIDEDSTSPPQKTENLDINSNPIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QVSSKVQKENKPQPNQPTNSIPIRDFSRKSLSEITPIKLRFRQSYNLIPRLPITRREMTS
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHH
IWRNLRLLKREGAPENLDVQGTINLFYKMGFFSGVVLQPSRKNQVKLVLLIDCEGSMSPF
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEECCCCCCHH
KLLIDTLQESIEKVGLLNQKNIFYFHNVPRGYLFTKPNLTKPLPIEEILSQEVGNNSVVI
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEE
VSDGGAARRTYDSERFHQTKEFIRQLSDKTYLYGWLNPVPEFQWRMTTAEDIATFIPMYS
EECCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCHHHHHHHHCCCC
LNPQGLNDLVKILLGYPFPMGVNLHG
CCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVDFELLIVEFETILLPLFNRLRQKDIPVGISEYLLAIKMIQSRGAWQDIERLKRLLCLL
CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
WVKSLEDQYIFNQLFEELVRPELEKQLLEADKSPLPKIDEDSTSPPQKTENLDINSNPIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QVSSKVQKENKPQPNQPTNSIPIRDFSRKSLSEITPIKLRFRQSYNLIPRLPITRREMTS
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHH
IWRNLRLLKREGAPENLDVQGTINLFYKMGFFSGVVLQPSRKNQVKLVLLIDCEGSMSPF
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEECCCCCCHH
KLLIDTLQESIEKVGLLNQKNIFYFHNVPRGYLFTKPNLTKPLPIEEILSQEVGNNSVVI
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEE
VSDGGAARRTYDSERFHQTKEFIRQLSDKTYLYGWLNPVPEFQWRMTTAEDIATFIPMYS
EECCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCHHHHHHHHCCCC
LNPQGLNDLVKILLGYPFPMGVNLHG
CCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA