| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475135
Identifier: 113475135
GI number: 113475135
Start: 2160042
End: 2160473
Strand: Reverse
Name: 113475135
Synonym: Tery_1427
Alternate gene names: NA
Gene position: 2160473-2160042 (Counterclockwise)
Preceding gene: 113475136
Following gene: 113475134
Centisome position: 27.88
GC content: 34.03
Gene sequence:
>432_bases ATGGGAGAAAACTACACTAATAATCTAGTCACTCGACTTATTTCAGAATTAAAACCTCGTTGTTTAGCAATGACCGGAGT TTGTGCAGGTAATAAAAAAAAGACTTTTTTAGGTGATGTAATTGTTGCAAATCGAGTCTTTAAATTTGACTATGGTAAAC TTGTTACTCATTACGAATCAATAGGTGATAAACAAATTTTTACTGAAGAAATATTCCATGATATTCGCACTTATAACTTG AAACGCCAATGGGAATTTATCATTCAAGAATTTCCCCAAGATTGGCTAAATACTATTCAAACTCCTAGACCAAAATCTGA CTATCATCAAGAACGTTGGTTACTCCACAAACTCTATGATTTTAAACAACAACCATACAAATATTCACGTCCTGACCAGC ACCCAGAAAGACCAACAGAATGCCCAGATTAG
Upstream 100 bases:
>100_bases ATATAAAGAGTTTAATTGATAATGTAATAAATATAGATTTATTATCAAAACTTAGATATATGGTACGCGATTAAATATAG CAGCAGCTCGTCCTGTAGAA
Downstream 100 bases:
>100_bases AGAAAAGTAATTCAACAATTAAGAGAAAAAGAATTATTAAAAACAGACTCCTTGGAATTAACCGAAAAAGCTCAGAAAGA AATTAACAATGAACGACTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside Phosphorylase-Like; WD Repeat-Containing Protein
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MGENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYESIGDKQIFTEEIFHDIRTYNL KRQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYDFKQQPYKYSRPDQHPERPTECPD
Sequences:
>Translated_143_residues MGENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYESIGDKQIFTEEIFHDIRTYNL KRQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYDFKQQPYKYSRPDQHPERPTECPD >Mature_142_residues GENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYESIGDKQIFTEEIFHDIRTYNLK RQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYDFKQQPYKYSRPDQHPERPTECPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17187; Mature: 17056
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYES CCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGDKQIFTEEIFHDIRTYNLKRQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYD CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH FKQQPYKYSRPDQHPERPTECPD HHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GENYTNNLVTRLISELKPRCLAMTGVCAGNKKKTFLGDVIVANRVFKFDYGKLVTHYES CCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGDKQIFTEEIFHDIRTYNLKRQWEFIIQEFPQDWLNTIQTPRPKSDYHQERWLLHKLYD CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH FKQQPYKYSRPDQHPERPTECPD HHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA