Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474903

Identifier: 113474903

GI number: 113474903

Start: 1784286

End: 1785884

Strand: Reverse

Name: 113474903

Synonym: Tery_1129

Alternate gene names: NA

Gene position: 1785884-1784286 (Counterclockwise)

Preceding gene: 113474904

Following gene: 113474902

Centisome position: 23.04

GC content: 29.02

Gene sequence:

>1599_bases
GTGAAAGAAAAAGTAACGCAATTGGAAACTAAATTAAATCAAACTGTTTCTGAAAAGATAGAGAGTTTAGAAATTTCATT
GGCAGAGGAGTTAAGCCTATCAAATAAGGTGAGAAATTCAGAAAATTATCAAGAACTTTACAGACAGCCACCCCCTGGTA
GAGCCTCTCAATCAAAAATTGATAGAATTAATAATATTTATTGGAAATTTAAGAATGAAGTTAAGTATCAAGAAAAATAT
GTAGATCAAGCACAAGGGAATTTAGAGAAAATAAAAGGTAGTATTAGGTCTATTGGTGAAGACCTTGATAGTTTGATATC
TGAGCTAGAAAATATATGCAGTTTAGCCAATAATAATCAAGAAGTTGGCGATGAAAAATATTTAGCTAAAAAGAATGAGT
ATTGTAATAAATTAAGAGATATTTATTTGCCACTAAAAGAGTCTACAAATTCAAGCTCAAATAACTTTAAAATTTTTAGT
AATAATTTAATAAGGATTGAAGAAAATGTTTCAGATGCCAAAAGATTTCTTCCTTCTTGGAATAATTGGCTAGCTGCACA
AAAAAAGGTTGTAGATACTAGATTAATTACTAGAGAACAGATAGATAATTGGATAGAATGTGCGAATCGTGAGTTGGATT
TTGTTGATCAAACAATTGATAATATAGACAGTGTTATACAAACAATTCCACAAGAAAAATCAGAGCTTATTCGTAAGATT
AAAACTATAGAAAAAGAATCTGACAATTTTGAGCTTCAGATTAGTGAATATGAAAACGTGAAAAGTTTGACATTAAATAA
GGAAATTATTAGTGGTACAGAAAATAATTTATTCCTCATAAATGATTTATTTGATCAAATTTCTCAAGCTGAAAAAAAGA
CTAAAATTTTAGTTGATAATTTAAGAAAGGAATCTGATAAAATAGAGGATAGAATCACACCCCTTAATAACTTATATTTT
GAAGGTCGCGATCTTCTGAAAGCTCCAAGATTTACTCAGGGGGCATTAAGTCAAAAACCTAATCTTCAAAGAAGGGTAGA
AAATGTTAATAATTTCAGGGTTAATGAACTTCCTTCTTTGAAAGAAAAAATACAGAATGAACTTGATAGTTATAAGTCTC
TGCAAAAGTCAATATTTCAGAAGTTAGGAGAAACTCGGTTATCAGTTAAAAATACCCAGGAGAGGTTTGAATACTTGAAC
AAAAGTATAGAAAAACGGCGTTTTATATCTACTATCCAATGGTCTGCTATCTTAGTAGTAATTGTAGCAGTTGTGATTAC
TATAGGTTACCACTTATATAGAAAAAGAATTTTGAGAAAACTAAACTGTCTTGATTATAAGAATTTAAAGAAACTACTTG
CTAGGATTAAGGATACTAAAGAATCTTTCACAATTAGACTAGAAGCAATAAAACTAATCTACGAACATCAAAATAATTTT
AATATTGACAAATTAGAATCATTAGTAAAACAACTAAAAGATACGGTAAAACAGATGGAAAAGTTTAAATATGATGATGA
TATAAAAGTTATTGGGGAGCTCAGAAAAGTAACAGAGTCTCTTGAGCTACGTCTAATGGAAAAGCGGAGTTTTAAATAA

Upstream 100 bases:

>100_bases
CTGGAAAAATCCAATTATTATTATATTATTAGTATTTTGTATACTTGCTGTCCGTCAACTGTATCAACCTCCATAATTTA
GTTTATCAGAGCTTGAATTA

Downstream 100 bases:

>100_bases
CTTAGAAATTAAAGACTGAAACATAGATAATTGACTATTAGGCTGATTAAATTCAAATAGAATTGTACATACTTCAAACA
ACATAATATATAAGGAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKIDRINNIYWKFKNEVKYQEKY
VDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQEVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFS
NNLIRIEENVSDAKRFLPSWNNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI
KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDNLRKESDKIEDRITPLNNLYF
EGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSLKEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLN
KSIEKRRFISTIQWSAILVVIVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF
NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK

Sequences:

>Translated_532_residues
MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKIDRINNIYWKFKNEVKYQEKY
VDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQEVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFS
NNLIRIEENVSDAKRFLPSWNNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI
KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDNLRKESDKIEDRITPLNNLYF
EGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSLKEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLN
KSIEKRRFISTIQWSAILVVIVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF
NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK
>Mature_532_residues
MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKIDRINNIYWKFKNEVKYQEKY
VDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQEVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFS
NNLIRIEENVSDAKRFLPSWNNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI
KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDNLRKESDKIEDRITPLNNLYF
EGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSLKEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLN
KSIEKRRFISTIQWSAILVVIVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF
NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62573; Mature: 62573

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHH
DRINNIYWKFKNEVKYQEKYVDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFSNNLIRIEENVSDAKRFLPSW
CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCEEEEECCHHHHHHHCCCH
NNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDN
HHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LRKESDKIEDRITPLNNLYFEGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSL
HHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHH
KEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLNKSIEKRRFISTIQWSAILVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHH
DRINNIYWKFKNEVKYQEKYVDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFSNNLIRIEENVSDAKRFLPSW
CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCEEEEECCHHHHHHHCCCH
NNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDN
HHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LRKESDKIEDRITPLNNLYFEGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSL
HHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHH
KEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLNKSIEKRRFISTIQWSAILVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA