Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474823

Identifier: 113474823

GI number: 113474823

Start: 1627718

End: 1628632

Strand: Direct

Name: 113474823

Synonym: Tery_1039

Alternate gene names: NA

Gene position: 1627718-1628632 (Clockwise)

Preceding gene: 113474822

Following gene: 113474824

Centisome position: 21.0

GC content: 40.0

Gene sequence:

>915_bases
GTGAACATTAAGGACAAATACTTACAAGCTAGCACTCTTTTCCTAACTTTGGTGACTGTAGGAGCTACCTCTGCAACTGC
GGCTAGCTTAAAAAGTTCTGATGTGGTCGTCATAGTTGATGAATATGGTTCTATGAACTACGAGCAAACATGGCTTGGCA
CGGTTATTCCACAGTTAGATACTGCTCTGCAAAATCAAGGTATCGTGGGCAACCGTTTTGGTCTTGTTGGATTTGGTACT
TCCAATCAAACCTTAGGACGATCTTTGCCTTTAGGTGGAGCCAAGTTTGGTAACTCTGCTGAATTTGCAACTGCTACAAA
TAGCTTACTATTAAAAGGTGGTTTTGAAGATGGTTATTCTGCAATTGACTTTGCTTTGAATAACTACACCTTCCGCGAAG
GTGCTGCTGTTAACTTCATCCTGGTGACAGACGAAGATCGGGATAATGGTAACTCTAGCCTCAACTTCAACAATATCCTG
GCCAGATTAAAGCGAAACCCTCAAGACAATAAAGATGATATTCTCTTGAATGCTATAGTCAATGCCAACTTTGTGAATAA
TTCTCTTGGAGTTAACTCTGAAGGAAATGCCTATATTGCCAACGGTAGTGGTGGATATACAACTACTCAACTTCCACAAC
CACTAACTAACTTTATTACCAGTGATTTTGGAACTACTAAATTAGACTATATAGATTTAGCTCTTGATAGTGGTGGCACA
GGATGGGACTTGAACCAACTACGTGATGGTGGTCTAACTGGAACTTCTTTCGCGAAGGCATTTATTGATATCAAAGTTGA
AGAGATTAAGAATCAACAGATACCCGAACCAGGTTTAGTTTTAGGTCTTTTGAGTGCGGGTGTTTTAGGTGTCATTTCAT
TGGGTAAAAAGCTAACTCAGAGTGTCTTAAACTGA

Upstream 100 bases:

>100_bases
GTCGACAACTGATAACTTTTTGATTTACCTATATTATACTCACCTATGATAATTACAATCTATCAAAGGCAAACGAGTAT
ATATCAAAAGGATAGAACTA

Downstream 100 bases:

>100_bases
AGCTGTAAGACTTAAGTCAGGCAAAGCAAAGCTTTTAACTTTTTAGGTATACCTGAGCAGGGCTGATAATTGCATTCACC
TATTTAATCTATGAGTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNIKDKYLQASTLFLTLVTVGATSATAASLKSSDVVVIVDEYGSMNYEQTWLGTVIPQLDTALQNQGIVGNRFGLVGFGT
SNQTLGRSLPLGGAKFGNSAEFATATNSLLLKGGFEDGYSAIDFALNNYTFREGAAVNFILVTDEDRDNGNSSLNFNNIL
ARLKRNPQDNKDDILLNAIVNANFVNNSLGVNSEGNAYIANGSGGYTTTQLPQPLTNFITSDFGTTKLDYIDLALDSGGT
GWDLNQLRDGGLTGTSFAKAFIDIKVEEIKNQQIPEPGLVLGLLSAGVLGVISLGKKLTQSVLN

Sequences:

>Translated_304_residues
MNIKDKYLQASTLFLTLVTVGATSATAASLKSSDVVVIVDEYGSMNYEQTWLGTVIPQLDTALQNQGIVGNRFGLVGFGT
SNQTLGRSLPLGGAKFGNSAEFATATNSLLLKGGFEDGYSAIDFALNNYTFREGAAVNFILVTDEDRDNGNSSLNFNNIL
ARLKRNPQDNKDDILLNAIVNANFVNNSLGVNSEGNAYIANGSGGYTTTQLPQPLTNFITSDFGTTKLDYIDLALDSGGT
GWDLNQLRDGGLTGTSFAKAFIDIKVEEIKNQQIPEPGLVLGLLSAGVLGVISLGKKLTQSVLN
>Mature_304_residues
MNIKDKYLQASTLFLTLVTVGATSATAASLKSSDVVVIVDEYGSMNYEQTWLGTVIPQLDTALQNQGIVGNRFGLVGFGT
SNQTLGRSLPLGGAKFGNSAEFATATNSLLLKGGFEDGYSAIDFALNNYTFREGAAVNFILVTDEDRDNGNSSLNFNNIL
ARLKRNPQDNKDDILLNAIVNANFVNNSLGVNSEGNAYIANGSGGYTTTQLPQPLTNFITSDFGTTKLDYIDLALDSGGT
GWDLNQLRDGGLTGTSFAKAFIDIKVEEIKNQQIPEPGLVLGLLSAGVLGVISLGKKLTQSVLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32297; Mature: 32297

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKDKYLQASTLFLTLVTVGATSATAASLKSSDVVVIVDEYGSMNYEQTWLGTVIPQLD
CCCCHHHHHHHHHEEEHHHHCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
TALQNQGIVGNRFGLVGFGTSNQTLGRSLPLGGAKFGNSAEFATATNSLLLKGGFEDGYS
HHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCH
AIDFALNNYTFREGAAVNFILVTDEDRDNGNSSLNFNNILARLKRNPQDNKDDILLNAIV
HHHHHCCCEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEE
NANFVNNSLGVNSEGNAYIANGSGGYTTTQLPQPLTNFITSDFGTTKLDYIDLALDSGGT
ECEEECCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCC
GWDLNQLRDGGLTGTSFAKAFIDIKVEEIKNQQIPEPGLVLGLLSAGVLGVISLGKKLTQ
CCCHHHHCCCCCCHHHHHHHHHEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLN
HHCC
>Mature Secondary Structure
MNIKDKYLQASTLFLTLVTVGATSATAASLKSSDVVVIVDEYGSMNYEQTWLGTVIPQLD
CCCCHHHHHHHHHEEEHHHHCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
TALQNQGIVGNRFGLVGFGTSNQTLGRSLPLGGAKFGNSAEFATATNSLLLKGGFEDGYS
HHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCH
AIDFALNNYTFREGAAVNFILVTDEDRDNGNSSLNFNNILARLKRNPQDNKDDILLNAIV
HHHHHCCCEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEE
NANFVNNSLGVNSEGNAYIANGSGGYTTTQLPQPLTNFITSDFGTTKLDYIDLALDSGGT
ECEEECCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCC
GWDLNQLRDGGLTGTSFAKAFIDIKVEEIKNQQIPEPGLVLGLLSAGVLGVISLGKKLTQ
CCCHHHHCCCCCCHHHHHHHHHEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLN
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA