Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474824

Identifier: 113474824

GI number: 113474824

Start: 1629979

End: 1630473

Strand: Direct

Name: 113474824

Synonym: Tery_1040

Alternate gene names: NA

Gene position: 1629979-1630473 (Clockwise)

Preceding gene: 113474823

Following gene: 113474826

Centisome position: 21.03

GC content: 38.79

Gene sequence:

>495_bases
ATGACAGTACAACCACCTCCACCCCCATCTATTACTCCACGCCAGATGGATTTGTTGCGGATTGTTGCTTATATGGCATG
GTCAGATGGACAACTGGCGCAAGAGGAAGTTGAGCTAATGTTGAATCGTTTTAGTAGTTTATTTGCTACAGGAGATTCCC
AACAACAACTTCAAGAGGAATTACGGGATTATCTCATGCAAAATATACCATTGGAGGAGTCAATCCCCAAATTAGAAAGT
CAACAAGAACGGGAACTTGTGCTGAAATTAGGTTATGAGGTAATCGCTTGTAGTGCTCGTACTCCTGAAGAAGCAAATAT
CAATGAAGAGGAAGAAGTTGCTTATCAAAAGTTAAAGCAGTTGCTTAATATTTCAAAGGATGTAGTAAAGCGTATAGAAG
CTGAGGCTAATACTGAACTTAATCAGCAAAAACAACAAGGAATTGTTGAGATGATGACTCATGGTCTAGAGCAACATTTA
CACAAACAAAATTAA

Upstream 100 bases:

>100_bases
ATAATAATTTTAGGAACGAAAGGAGGAAGAAAGTAGAAATTACACTAAATGATAAGTTAAAAGTTCAGCTATAGAATAGT
CAATAACTAAGGAAAAATTT

Downstream 100 bases:

>100_bases
ATTTATTTATGGAAAATGCAACAACTTATTTATTGTTGCTTTTTTTACCTTTTTTTTACTTTCTTCAGACTAGGAAGTAA
CTGAGAGTTTATATTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTVQPPPPPSITPRQMDLLRIVAYMAWSDGQLAQEEVELMLNRFSSLFATGDSQQQLQEELRDYLMQNIPLEESIPKLES
QQERELVLKLGYEVIACSARTPEEANINEEEEVAYQKLKQLLNISKDVVKRIEAEANTELNQQKQQGIVEMMTHGLEQHL
HKQN

Sequences:

>Translated_164_residues
MTVQPPPPPSITPRQMDLLRIVAYMAWSDGQLAQEEVELMLNRFSSLFATGDSQQQLQEELRDYLMQNIPLEESIPKLES
QQERELVLKLGYEVIACSARTPEEANINEEEEVAYQKLKQLLNISKDVVKRIEAEANTELNQQKQQGIVEMMTHGLEQHL
HKQN
>Mature_163_residues
TVQPPPPPSITPRQMDLLRIVAYMAWSDGQLAQEEVELMLNRFSSLFATGDSQQQLQEELRDYLMQNIPLEESIPKLESQ
QERELVLKLGYEVIACSARTPEEANINEEEEVAYQKLKQLLNISKDVVKRIEAEANTELNQQKQQGIVEMMTHGLEQHLH
KQN

Specific function: Unknown

COG id: COG4674

COG function: function code R; Uncharacterized ABC-type transport system, ATPase component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18901; Mature: 18770

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQPPPPPSITPRQMDLLRIVAYMAWSDGQLAQEEVELMLNRFSSLFATGDSQQQLQEE
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LRDYLMQNIPLEESIPKLESQQERELVLKLGYEVIACSARTPEEANINEEEEVAYQKLKQ
HHHHHHHCCCCHHHCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LLNISKDVVKRIEAEANTELNQQKQQGIVEMMTHGLEQHLHKQN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVQPPPPPSITPRQMDLLRIVAYMAWSDGQLAQEEVELMLNRFSSLFATGDSQQQLQEE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LRDYLMQNIPLEESIPKLESQQERELVLKLGYEVIACSARTPEEANINEEEEVAYQKLKQ
HHHHHHHCCCCHHHCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LLNISKDVVKRIEAEANTELNQQKQQGIVEMMTHGLEQHLHKQN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA