Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474755

Identifier: 113474755

GI number: 113474755

Start: 1502663

End: 1503307

Strand: Reverse

Name: 113474755

Synonym: Tery_0953

Alternate gene names: NA

Gene position: 1503307-1502663 (Counterclockwise)

Preceding gene: 113474756

Following gene: 113474750

Centisome position: 19.4

GC content: 33.02

Gene sequence:

>645_bases
ATGAGTCAATCTGACCAAAATAAAGTATTACGAATGCTTCCTATAATAGCAGGAGGATTAGGTGCAACTTTACTTATGAC
TAATAGATTTTTCACCCCTAATCTTTTAGCTTCCCAAACTCGTTCTGATGTAGTAGGAGTAATTTTAAGTGCTTTTTTAA
TTTTGACTGGTTTACTTTGGCAACAAATACAACCACGCTCTCCTGATACTGTCAAATTAATTGGTAAATCAGAATTTGAA
TTATTGCCAGAATTATCAGAGATAGTCAAAACTGAACTAGCTTGGGCTTCTAGTTTACTACTAACTAATACAGTTACTAA
GACTGTTATTATCTGGCATCAAGAGAAGGTCTTATTAAGAAGAGGAATTTTACCATCTGAATCATACATCAAGCCAGGAA
CTATTTTAAAGCAAGTTTTGGGTAAGCAAAAACCTATTTATTTAGTAGATTTAAAAGTTTATCCAGGTCGCATTGAGTTT
AATTATTTGCCAGAAAATACCCAAGGTGTAATTTGTCAACCTCTTGGCAATAATGGTGTAATGATCTTGGGTGCAAATGC
ACCTCGCAGTTACACTAAACAAGATGAAAATTGGATTTCAGGAATAGCAGATAAATTAACAGATACCTTATCAAAAAAAT
TATAG

Upstream 100 bases:

>100_bases
CAAAGGTTAACTAATTATTAGTAACTAGAAACTAGGGTTTTGATTATCTAATAACTGACAACTAATAGCTGTAAAGACGT
TCTTTTGTCTTCCTTAAAAT

Downstream 100 bases:

>100_bases
TACAGTGCTGTGTTTAGAGAGATTTAACTAACCTTTTTTGTACTGTTACTCAATTAAGTCCTAACATTATCACAATTTAT
TTTACTGTTTTTACTGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSQSDQNKVLRMLPIIAGGLGATLLMTNRFFTPNLLASQTRSDVVGVILSAFLILTGLLWQQIQPRSPDTVKLIGKSEFE
LLPELSEIVKTELAWASSLLLTNTVTKTVIIWHQEKVLLRRGILPSESYIKPGTILKQVLGKQKPIYLVDLKVYPGRIEF
NYLPENTQGVICQPLGNNGVMILGANAPRSYTKQDENWISGIADKLTDTLSKKL

Sequences:

>Translated_214_residues
MSQSDQNKVLRMLPIIAGGLGATLLMTNRFFTPNLLASQTRSDVVGVILSAFLILTGLLWQQIQPRSPDTVKLIGKSEFE
LLPELSEIVKTELAWASSLLLTNTVTKTVIIWHQEKVLLRRGILPSESYIKPGTILKQVLGKQKPIYLVDLKVYPGRIEF
NYLPENTQGVICQPLGNNGVMILGANAPRSYTKQDENWISGIADKLTDTLSKKL
>Mature_213_residues
SQSDQNKVLRMLPIIAGGLGATLLMTNRFFTPNLLASQTRSDVVGVILSAFLILTGLLWQQIQPRSPDTVKLIGKSEFEL
LPELSEIVKTELAWASSLLLTNTVTKTVIIWHQEKVLLRRGILPSESYIKPGTILKQVLGKQKPIYLVDLKVYPGRIEFN
YLPENTQGVICQPLGNNGVMILGANAPRSYTKQDENWISGIADKLTDTLSKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23771; Mature: 23640

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSDQNKVLRMLPIIAGGLGATLLMTNRFFTPNLLASQTRSDVVGVILSAFLILTGLLW
CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QQIQPRSPDTVKLIGKSEFELLPELSEIVKTELAWASSLLLTNTVTKTVIIWHQEKVLLR
HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHH
RGILPSESYIKPGTILKQVLGKQKPIYLVDLKVYPGRIEFNYLPENTQGVICQPLGNNGV
HCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCEEEEEECCCCCCCEEEEEECCCCE
MILGANAPRSYTKQDENWISGIADKLTDTLSKKL
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQSDQNKVLRMLPIIAGGLGATLLMTNRFFTPNLLASQTRSDVVGVILSAFLILTGLLW
CCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QQIQPRSPDTVKLIGKSEFELLPELSEIVKTELAWASSLLLTNTVTKTVIIWHQEKVLLR
HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHH
RGILPSESYIKPGTILKQVLGKQKPIYLVDLKVYPGRIEFNYLPENTQGVICQPLGNNGV
HCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCEEEEEECCCCCCCEEEEEECCCCE
MILGANAPRSYTKQDENWISGIADKLTDTLSKKL
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA