Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474078

Identifier: 113474078

GI number: 113474078

Start: 259770

End: 261428

Strand: Direct

Name: 113474078

Synonym: Tery_0174

Alternate gene names: NA

Gene position: 259770-261428 (Clockwise)

Preceding gene: 113474077

Following gene: 113474079

Centisome position: 3.35

GC content: 38.1

Gene sequence:

>1659_bases
ATGAAACCTATATTTCGGGCTATTATTCTAGCCTTCCTGGCATTAACTTTAACAAGTTGTTCATTACCACCAGATCAAAT
TGCCTCTCGACTAGAACCTAGTCTTGTTAAAGTATTTTATAAAAATCAACCCGGACATGGAACTGGTTTTTTTGTACCTG
GAGAAACAGGAGTTTGTAAGGTACTGACGGCAGCTCATGTTGTGAACAAAGAAGGGGAAAAATTATTACAAACTAAAGAT
GGTAATGTCTGGGATGCTGCATCTGTTGAAATGTTTTCAGATGATATAGACTTGGCTTTAGTAACTTTTGAGCCAGAGAA
AGAAAAATGTGATTATCCTACTCTCAAAATAGGTAATTCAGAGGATATCAAACAAGGTAGTTCTATATATGTTTCTGGCC
TTTCTAGTCGGGATGGGAAGATGCTATCTCAATTTGTTAAAGGAAATGTTACGGCTTTGAATGTTTTTCCACAGGGTTAT
AGGGTTTCTTATCAAGCTTTGACTGTCGCTGGAATGAGTGGAGCTCCTGTTATAGATGAGAGGGGTAAGGTGGTGGCAGT
TCATGGGATGAGTGATGTGGAAACAGTTAAAGGTTTTAGTTCTTTGAAAACAAGTTGGCCTGAGTTAGAGTTACAGACTA
CCTGGCAAGCTGAAGAAGTTGTGAATACTGCTATTAAACATTTGACTTTTTCTTGGGGTATACCTATTAGTTTCTTTAGG
GAGTCTCCGTTTTACTATGACTCTGGGGATATCTATGGGTTAAGCTGGTGGATATTTTTGTCTGGTGCAGGAATAGTTGC
TGTTAGTTTTATTTATGTTGGTTTCAGGTATTTAAATGTTTCACCATTTATTGCTGAAGTTAATAATTTGAAAACACAAC
TCCAGGATGAGGAAGACAAAGGGGAAGAGGTTCAGAAAGAGTTAAAGTCACTAAAAAATAGTTATAAGGGGTTGGAAAGA
AAACTGGAAGCGGAAATATCGGAGAGATCTGAGGCTGAGGAGCAAATTCAAACTCTACAAGTTGTTGTGGAAAAACAAAA
AGTGTTGGAAGTGCAACTAGAAATTGAGATGTCAACAAGATATCAGGTTGAGGAGCAAATTCAAACTCTACAAGTTGCTG
CACAAAAGGAAAGGGAGTTGGAAAGGCAGTTGGAGTTTGAGTCTCAAAATACTGAAGATAAGTCTGGTGTTGATTTATTT
CTGGTTTCTGAGGTGGTCGGTGACTATACTAAGTTGCGTGATCTATTGGCGGCTAAACAGTGGCGCGAAGCAGACTTAGA
AACATATAAAAGAATGTTAGAGGTGGCGGGCAGAAACTTGAAGGGATCTTTGAGGGTTAAGGATGTGTATAATTTTCCTT
GCAAAGATTTAGTGACTATTGACGAACTGTGGATAAAATATAGTGATGGTAAGTTTGGCTTGTCTGTTCAGAAGCAAATT
TATGAGAGCATGGGTGGTACGAAAGACTATGACTATAAGGTAATAGAAGATTTTGGAAATAGAGTTGGGTGGCGTCAAGA
TGGAAAATGGTTGAGGTATCATTATTTGACTTTTAGTGAGAAGTATGAAATGGGGTGTTTACCAGTAAGTTTTTATCTTG
AGAGGGTTGCTTCTCTTCTGTTTGCAGGAATGTGCAAGTTTATAGACTGTGATCTTTAG

Upstream 100 bases:

>100_bases
AACTCTTAAGCCTCTGCCTAACAATCAAAAATACAAATGGTTGTAGGTAAAATCAAAAAACAATTAACCTTTAACTTTTG
CCCCTTTCTTTTTTATAAAG

Downstream 100 bases:

>100_bases
TTGTTTCACTTTTGTTTTTTGATGATTTTTTACTCTTTGAGTTTATCTGATGTTTAGGATATGCTCCTCTTTTACTACTA
GAAAAGTGGCTGGGAAGTTG

Product: GUN4-like

Products: NA

Alternate protein names: GUN4 Domain-Containing Protein; GUN4-Like; TPR Domain-Containing Protein; GUN4-Like Family; Serine/Threonine Protein Kinase; TPR Repeat-Containing Protein; GUN4-Like Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Protease; GUN4-Like Family Protein; WD-40 Repeat-Containing Protein; Protein Kinase; Tetratricopeptide Repeat Domain Protein; Trypsin-Like Serine Protease; Serine/Threonine Kinase; Serine Protease; Signal Transduction Protein With Nacht Domain; Signal Transduction Protein With Nacht Domain Protein; Peptidase; GUN4-Like Superfamily; Periplasmic Protein; Gun4 Domain-Containing Protein

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCKVLTAAHVVNKEGEKLLQTKD
GNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNSEDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGY
RVSYQALTVAGMSGAPVIDERGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR
ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDKGEEVQKELKSLKNSYKGLER
KLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTRYQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLF
LVSEVVGDYTKLRDLLAAKQWREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI
YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLLFAGMCKFIDCDL

Sequences:

>Translated_552_residues
MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCKVLTAAHVVNKEGEKLLQTKD
GNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNSEDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGY
RVSYQALTVAGMSGAPVIDERGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR
ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDKGEEVQKELKSLKNSYKGLER
KLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTRYQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLF
LVSEVVGDYTKLRDLLAAKQWREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI
YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLLFAGMCKFIDCDL
>Mature_552_residues
MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCKVLTAAHVVNKEGEKLLQTKD
GNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNSEDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGY
RVSYQALTVAGMSGAPVIDERGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR
ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDKGEEVQKELKSLKNSYKGLER
KLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTRYQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLF
LVSEVVGDYTKLRDLLAAKQWREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI
YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLLFAGMCKFIDCDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62576; Mature: 62576

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCK
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHEECCCCCCCCEEEECCCCCHHH
VLTAAHVVNKEGEKLLQTKDGNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNS
HHHHHHHHCCCCHHHHHCCCCCEECCCCHHEECCCCCEEEEEECCCCCCCCCCEEEECCC
EDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGYRVSYQALTVAGMSGAPVIDE
HHHCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCC
RGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR
CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHEEECCCCHHHHC
ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDK
CCCCEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
GEEVQKELKSLKNSYKGLERKLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCH
YQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLFLVSEVVGDYTKLRDLLAAKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
WREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHEEEHHEEEECCCCCCHHHHHHH
YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLL
HHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHH
FAGMCKFIDCDL
HHHHHHHHCCCC
>Mature Secondary Structure
MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCK
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHEECCCCCCCCEEEECCCCCHHH
VLTAAHVVNKEGEKLLQTKDGNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNS
HHHHHHHHCCCCHHHHHCCCCCEECCCCHHEECCCCCEEEEEECCCCCCCCCCEEEECCC
EDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGYRVSYQALTVAGMSGAPVIDE
HHHCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCC
RGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR
CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHEEECCCCHHHHC
ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDK
CCCCEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
GEEVQKELKSLKNSYKGLERKLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCH
YQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLFLVSEVVGDYTKLRDLLAAKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
WREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHEEEHHEEEECCCCCCHHHHHHH
YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLL
HHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHH
FAGMCKFIDCDL
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA