Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is thrC [H]

Identifier: 113474047

GI number: 113474047

Start: 204811

End: 205926

Strand: Reverse

Name: thrC [H]

Synonym: Tery_0140

Alternate gene names: 113474047

Gene position: 205926-204811 (Counterclockwise)

Preceding gene: 113474052

Following gene: 113474045

Centisome position: 2.66

GC content: 42.03

Gene sequence:

>1116_bases
ATGACTTTAGAATTATCATATCAGTCAAAATTATTGTCCCCCTATCAGTCAAAATTACAAGGTTGGCCTGGCTTGATCGA
GGCCTATAGATCCTATCTACCTGTCACAGAAGAAACTCCTGTGGTGTCACTGAAAGAAGGTAATACTCCTCTGATTCCTG
TGCCAGCCATCGCCGATAAAATAGGCAGACAGGTGGAAGTATTTGTTAAATATGATGGCCTCAATCCCACGGGTAGTTTC
AAAGATAGAGGCATGACTTTAGCCATATCTAAGGCTAAAGAGGCAGGAGCTAAAGCAGTAATATGTGCCAGTACAGGCAA
TACTTCTGCTGCTGCCGCAGCTTATGCTTTACGGGGTGGGATGCGAGCTTTTGTTTTAATACCTGATGGTTATGTAGCTC
TAGGAAAGTTAGCTCAAGCTTTGTTATATGGGGCTGAAGTTTTAGCAATAAAGGGAAACTTTGACCAAGCCCTACAAATT
GTCAAGGATGTGGCTAAGAAATATCCCGTGACTTTGGTCAATTCAGTTAATCCCTATCGTCTGGAAGGTCAAAAAACAGG
TGCTTTTGAGCTGGTGGATACTTTAGGCGATGCCCCAGATTGGTTATGTATTCCTGTGGGAAATGCCGGAAATATTACTG
CATATTGGATGGGATTTTGTCAATACCATAAAAGTAAAAAATGCGATCGCCTACCAAAAATGATGGGCTTTCAGGCTGCA
GGAGCAGCACCTATTGTTAAAGGCTATCCTATAGCTCATCCAGAAACAGTGGCCAGTGCTATTAGGATTGGCAACCCTGC
TAGTTGGAAAAAAGCAATAGAAGCTCAAAAAGCTAGTCAGGGAAGTTTTACTGCTGTTACTGATGAGGAAATATTAGAAG
CTTATCGTTTATTGGCTTCTAATGAAGGGATTTTTTGTGAGCCTGCTAGTGCCGCTTCTGTTGCTGGTTTACTCAAGATT
AAAGACCAAGTTCCCAGAGGAGCAAAGATAGTTTGTGTGCTTACTGGTCATGGTCTTAAAGACCCAGATGTAGCAATTAA
ACATAGCCATAATGATCACTTTTCCCAGGGAATAGAGCCAACTACGGAGGCAGTTGCTAAAATTATGGGATTATGA

Upstream 100 bases:

>100_bases
AAGTTCTAAGGCTCATTTATCTTGTTGCGAAGTGTCAGCTTATAATTCCTCTAATTTCAGTATTAAGAGTAGTCAAATTA
AACAATTCAAAACTTTAAAG

Downstream 100 bases:

>100_bases
CAAAGTTCCCAGAAGAAAAATATTTTGGGTTTGACAATTAAGTTTTTTCTCTAATCTTTACCAATTGTTGAGGTCTTCCC
CGACCTCAAGGCAATAGGTT

Product: threonine synthase

Products: NA

Alternate protein names: TS [H]

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MTLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADKIGRQVEVFVKYDGLNPTGSF
KDRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGGMRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQI
VKDVAKKYPVTLVNSVNPYRLEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAA
GAAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLASNEGIFCEPASAASVAGLLKI
KDQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEPTTEAVAKIMGL

Sequences:

>Translated_371_residues
MTLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADKIGRQVEVFVKYDGLNPTGSF
KDRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGGMRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQI
VKDVAKKYPVTLVNSVNPYRLEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAA
GAAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLASNEGIFCEPASAASVAGLLKI
KDQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEPTTEAVAKIMGL
>Mature_370_residues
TLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADKIGRQVEVFVKYDGLNPTGSFK
DRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGGMRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQIV
KDVAKKYPVTLVNSVNPYRLEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAAG
AAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLASNEGIFCEPASAASVAGLLKIK
DQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEPTTEAVAKIMGL

Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]

COG id: COG0498

COG function: function code E; Threonine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the threonine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001926
- InterPro:   IPR000634
- InterPro:   IPR004450 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.2.3.1 [H]

Molecular weight: Translated: 39551; Mature: 39420

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADK
CEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCHHHHH
IGRQVEVFVKYDGLNPTGSFKDRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGG
CCCEEEEEEEECCCCCCCCCCCCCEEEEEECHHHCCCCEEEEECCCCCHHHHHHHHHHCC
MRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQIVKDVAKKYPVTLVNSVNPYR
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCEEEECCCCCEE
LEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAA
ECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
GAAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLAS
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHC
NEGIFCEPASAASVAGLLKIKDQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEP
CCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCCHHHCCCCH
TTEAVAKIMGL
HHHHHHHHHCC
>Mature Secondary Structure 
TLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADK
EEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCHHHHH
IGRQVEVFVKYDGLNPTGSFKDRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGG
CCCEEEEEEEECCCCCCCCCCCCCEEEEEECHHHCCCCEEEEECCCCCHHHHHHHHHHCC
MRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQIVKDVAKKYPVTLVNSVNPYR
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCEEEECCCCCEE
LEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAA
ECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
GAAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLAS
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHC
NEGIFCEPASAASVAGLLKIKDQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEP
CCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCCHHHCCCCH
TTEAVAKIMGL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]