Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is pilZ

Identifier: 110833937

GI number: 110833937

Start: 1217792

End: 1218139

Strand: Direct

Name: pilZ

Synonym: ABO_1076

Alternate gene names: NA

Gene position: 1217792-1218139 (Clockwise)

Preceding gene: 110833936

Following gene: 110833938

Centisome position: 39.03

GC content: 50.86

Gene sequence:

>348_bases
ATGAAGATGCCGGTAGGTCGCAATGGCATTCTGTCGCTTTCCATCAAAGATAAAGCGGTGCTGTATTCGGCTTACATGCC
GTTCATTACCAACGGCGGTTTGTTTATTCCCACTGAAAAGCAATACACGTTAGGGGAAGAGATCTTCCTGCTACTGAACA
TTATGGATGAAGCCGATAAGATTCCAGTGGCTGGCAAGGTCGTGTGGATCACCCCCAAAGGGGCTCAAGGGAACCGTAGT
GCGGGGATCGGTGTGCAATTCTCCGATCAGGACGATACCGCCCGCGTTACCATCGAGAATCATCTGGCCGGTTCACTGGA
ATCGGATCGTCCTACGTATACCATGTGA

Upstream 100 bases:

>100_bases
CTACGAGCAGTGGTTGTTGGTGTTGGTGGGCGTTGACGCTGCGGCGGCGGCGCACTAACCTTGATTATAGATTAATAATA
ATTTCGTAAGGGGTTGGTTC

Downstream 100 bases:

>100_bases
GAGGCTGACTCGTATTGCGCTGCGTGCAACAACGCAAGCGTGTTGGGTTCTGGCTGTCAAATAAGAAGGCCGCCTCTTTT
TTAGGACGCGGCCTTCTGTA

Product: type IV fimbriae assembly protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilZ; Type 4 Fimbrial Biogenesis Protein PilZ; Type 4 Fimbrial Biogenesis Protein; Type IV Fimbriae Assembly Protein; Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly Protein; Type IV Fimbrial Biogenesis Protein PilZ; Tfp Pilus Assembly Protein PilZ; Type 4 Fimbrial Biogenesis Protein PILZ; Pilus Biogenesis Protein PilZ; Type Iv Pilus Assembly Pilz; DNA Polymerase-Related Protein; Tfp Pilus Assembly Protein; TYPE 4 Pilus Assembly Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKMPVGRNGILSLSIKDKAVLYSAYMPFITNGGLFIPTEKQYTLGEEIFLLLNIMDEADKIPVAGKVVWITPKGAQGNRS
AGIGVQFSDQDDTARVTIENHLAGSLESDRPTYTM

Sequences:

>Translated_115_residues
MKMPVGRNGILSLSIKDKAVLYSAYMPFITNGGLFIPTEKQYTLGEEIFLLLNIMDEADKIPVAGKVVWITPKGAQGNRS
AGIGVQFSDQDDTARVTIENHLAGSLESDRPTYTM
>Mature_115_residues
MKMPVGRNGILSLSIKDKAVLYSAYMPFITNGGLFIPTEKQYTLGEEIFLLLNIMDEADKIPVAGKVVWITPKGAQGNRS
AGIGVQFSDQDDTARVTIENHLAGSLESDRPTYTM

Specific function: Unknown

COG id: COG3215

COG function: function code NU; Tfp pilus assembly protein PilZ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12579; Mature: 12579

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMPVGRNGILSLSIKDKAVLYSAYMPFITNGGLFIPTEKQYTLGEEIFLLLNIMDEADK
CCCCCCCCCEEEEEECCCEEEEEEECCEECCCCEEEECCCCCCCCCEEEEEEEECCCCCC
IPVAGKVVWITPKGAQGNRSAGIGVQFSDQDDTARVTIENHLAGSLESDRPTYTM
CCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKMPVGRNGILSLSIKDKAVLYSAYMPFITNGGLFIPTEKQYTLGEEIFLLLNIMDEADK
CCCCCCCCCEEEEEECCCEEEEEEECCEECCCCEEEECCCCCCCCCEEEEEEEECCCCCC
IPVAGKVVWITPKGAQGNRSAGIGVQFSDQDDTARVTIENHLAGSLESDRPTYTM
CCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA