| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is tsaA [H]
Identifier: 110833584
GI number: 110833584
Start: 813876
End: 814478
Strand: Direct
Name: tsaA [H]
Synonym: ABO_0723
Alternate gene names: 110833584
Gene position: 813876-814478 (Clockwise)
Preceding gene: 110833583
Following gene: 110833586
Centisome position: 26.08
GC content: 54.73
Gene sequence:
>603_bases ATGGGCGTTCTGGTAGGTAAACCTGCACCGGATTTTACTGTTCCTGCTGTATTGGGCGATGGCAGCATCGTTGATGAGTT CACCCTGTCTGAAGCCATTAAAGGCAAGTATGGCCTGGTGTTCTTCTACCCGCTGGACTTCACCTTCGTGTGCCCGTCCG AGCTAATTGCTCTGGATCATCGCATGGACGCGTTCAAAGAACGCAACGTGGAAGTGATTGGCGTTTCCATCGATAGTCAT TTTACTCACAACGCATGGCGCAACACGCCGGTTAACGATGGCGGCATCGGCCCAGTGAAATACACCCTGGCCGCAGACAT GAACCACGGTATTGCCCAGTCCTATGACGTTGAGTCCGAAGGCGGTATGGCTTTCCGTGGTGTGTTCCTGATCGATCAAA ACGGTGTCGTGCGCAGCCAGATCGTTAACGATCTGCCACTGGGTCGTAACATGGACGAGCTGATTCGTCTGGTTGATGCC CTGCAGTTCCACGAAGAGCACGGTGAAGTGTGCCCGGCGGGCTGGCAGAAAGGCGATTCCGGTATGAAGGACACCCCGGA CGGCGTGGCCGAGTACCTGTCTGGTAATGCCGACAAACTGTAA
Upstream 100 bases:
>100_bases TGCCATGGGCGTTGTATGATCTGCTGCACTGATTTCAAGCGGCCAGAGAGATGGCACTGCTCTGGCTATATCGTATAAAT GGAAACAATGGAGAGAAACA
Downstream 100 bases:
>100_bases TAATAAGCCGCACAAAGAAAAGGGGCGCTAGAAATAGCGCCCCTTTTTTATGCTGTTTTCTGGATGCTTGAAGCTGGATG ACTGGCGTTAAAATCTAGAT
Product: oxidoreductase
Products: NA
Alternate protein names: 26 kDa antigen; Thioredoxin reductase [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGVLVGKPAPDFTVPAVLGDGSIVDEFTLSEAIKGKYGLVFFYPLDFTFVCPSELIALDHRMDAFKERNVEVIGVSIDSH FTHNAWRNTPVNDGGIGPVKYTLAADMNHGIAQSYDVESEGGMAFRGVFLIDQNGVVRSQIVNDLPLGRNMDELIRLVDA LQFHEEHGEVCPAGWQKGDSGMKDTPDGVAEYLSGNADKL
Sequences:
>Translated_200_residues MGVLVGKPAPDFTVPAVLGDGSIVDEFTLSEAIKGKYGLVFFYPLDFTFVCPSELIALDHRMDAFKERNVEVIGVSIDSH FTHNAWRNTPVNDGGIGPVKYTLAADMNHGIAQSYDVESEGGMAFRGVFLIDQNGVVRSQIVNDLPLGRNMDELIRLVDA LQFHEEHGEVCPAGWQKGDSGMKDTPDGVAEYLSGNADKL >Mature_199_residues GVLVGKPAPDFTVPAVLGDGSIVDEFTLSEAIKGKYGLVFFYPLDFTFVCPSELIALDHRMDAFKERNVEVIGVSIDSHF THNAWRNTPVNDGGIGPVKYTLAADMNHGIAQSYDVESEGGMAFRGVFLIDQNGVVRSQIVNDLPLGRNMDELIRLVDAL QFHEEHGEVCPAGWQKGDSGMKDTPDGVAEYLSGNADKL
Specific function: Directly Reduces Organic Hydroperoxides In Its Reduced Dithiol Form. [C]
COG id: COG0450
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4505591, Length=191, Percent_Identity=51.3089005235602, Blast_Score=202, Evalue=1e-52, Organism=Homo sapiens, GI32455266, Length=191, Percent_Identity=51.3089005235602, Blast_Score=202, Evalue=1e-52, Organism=Homo sapiens, GI32455264, Length=191, Percent_Identity=51.3089005235602, Blast_Score=202, Evalue=1e-52, Organism=Homo sapiens, GI32189392, Length=191, Percent_Identity=51.8324607329843, Blast_Score=201, Evalue=3e-52, Organism=Homo sapiens, GI5453549, Length=190, Percent_Identity=46.8421052631579, Blast_Score=184, Evalue=5e-47, Organism=Homo sapiens, GI5802974, Length=161, Percent_Identity=49.6894409937888, Blast_Score=178, Evalue=3e-45, Organism=Homo sapiens, GI32483377, Length=161, Percent_Identity=49.6894409937888, Blast_Score=177, Evalue=4e-45, Organism=Homo sapiens, GI33188454, Length=82, Percent_Identity=57.3170731707317, Blast_Score=94, Evalue=5e-20, Organism=Homo sapiens, GI4758638, Length=191, Percent_Identity=29.3193717277487, Blast_Score=74, Evalue=6e-14, Organism=Escherichia coli, GI1786822, Length=160, Percent_Identity=33.75, Blast_Score=112, Evalue=2e-26, Organism=Caenorhabditis elegans, GI193204376, Length=194, Percent_Identity=48.9690721649485, Blast_Score=182, Evalue=9e-47, Organism=Caenorhabditis elegans, GI32565831, Length=192, Percent_Identity=49.4791666666667, Blast_Score=182, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17554494, Length=188, Percent_Identity=45.7446808510638, Blast_Score=176, Evalue=1e-44, Organism=Caenorhabditis elegans, GI25153706, Length=179, Percent_Identity=29.0502793296089, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323613, Length=196, Percent_Identity=42.8571428571429, Blast_Score=160, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320661, Length=191, Percent_Identity=41.3612565445026, Blast_Score=149, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6319407, Length=180, Percent_Identity=30, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI24656348, Length=194, Percent_Identity=49.4845360824742, Blast_Score=196, Evalue=9e-51, Organism=Drosophila melanogaster, GI17864676, Length=194, Percent_Identity=49.4845360824742, Blast_Score=196, Evalue=9e-51, Organism=Drosophila melanogaster, GI17738015, Length=187, Percent_Identity=47.0588235294118, Blast_Score=183, Evalue=5e-47, Organism=Drosophila melanogaster, GI17157991, Length=192, Percent_Identity=45.8333333333333, Blast_Score=174, Evalue=3e-44, Organism=Drosophila melanogaster, GI24641739, Length=192, Percent_Identity=45.8333333333333, Blast_Score=174, Evalue=3e-44, Organism=Drosophila melanogaster, GI21357347, Length=191, Percent_Identity=43.455497382199, Blast_Score=167, Evalue=6e-42, Organism=Drosophila melanogaster, GI24581278, Length=185, Percent_Identity=27.5675675675676, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI17975518, Length=160, Percent_Identity=29.375, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2250 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 6040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Stationary-Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR019479 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF10417 1-cysPrx_C; PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 21774; Mature: 21643
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLVGKPAPDFTVPAVLGDGSIVDEFTLSEAIKGKYGLVFFYPLDFTFVCPSELIALDH CCEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHHHHH RMDAFKERNVEVIGVSIDSHFTHNAWRNTPVNDGGIGPVKYTLAADMNHGIAQSYDVESE HHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC GGMAFRGVFLIDQNGVVRSQIVNDLPLGRNMDELIRLVDALQFHEEHGEVCPAGWQKGDS CCEEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GMKDTPDGVAEYLSGNADKL CCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure GVLVGKPAPDFTVPAVLGDGSIVDEFTLSEAIKGKYGLVFFYPLDFTFVCPSELIALDH CEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHHHHH RMDAFKERNVEVIGVSIDSHFTHNAWRNTPVNDGGIGPVKYTLAADMNHGIAQSYDVESE HHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC GGMAFRGVFLIDQNGVVRSQIVNDLPLGRNMDELIRLVDALQFHEEHGEVCPAGWQKGDS CCEEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GMKDTPDGVAEYLSGNADKL CCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682; 1987145 [H]