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The map label for this gene is ydhD [H]

Identifier: 110833583

GI number: 110833583

Start: 813207

End: 813539

Strand: Direct

Name: ydhD [H]

Synonym: ABO_0722

Alternate gene names: 110833583

Gene position: 813207-813539 (Clockwise)

Preceding gene: 110833582

Following gene: 110833584

Centisome position: 26.06

GC content: 52.55

Gene sequence:

>333_bases
ATGGATGTTATCCAGGTCATCAAAGACCAGATCGAAAAGAACCCGGTGATCCTCTACATGAAAGGGTCCCCCCAGTTTCC
CCAGTGTGGGTTTTCCGCACAGGTGGTGGAAGCGATGACCGCCGTTGGCAAGCCGTTTGCCTATGTGAATATTCTGGAAG
CCCCAGAAATTCGTCAGAATCTGAAAGAATATGCTAACTGGCCGACTTACCCGCAGTTGTGGGTGGGCGGCGAATTGGTT
GGCGGCTGCGACATCATTATGGATATGTACCGCTCCGGTCAGCTTAAAGAGATGGTTGACGGCGTTGCCGTGGAATCGGA
TGACGACGCTTGA

Upstream 100 bases:

>100_bases
AGCTGCGCCTCTGTGACCCCATCTGGGATGGGCAGGGCCATCAGTGGTAGAATAGTGGCCAACCACAGCCAATACACCCC
ACAACCGCCAGGTAGTCAGT

Downstream 100 bases:

>100_bases
ATAGGGCGTTAGTATTACGTAAAACCCGGCCTTAGCGCCGGGTTTTTTTGTCTATAGCGTCTTTTTTTGTGGCATTCTTG
TTGATCTGCTGCAGTTGATT

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: Grx4; Monothiol glutaredoxin [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDVIQVIKDQIEKNPVILYMKGSPQFPQCGFSAQVVEAMTAVGKPFAYVNILEAPEIRQNLKEYANWPTYPQLWVGGELV
GGCDIIMDMYRSGQLKEMVDGVAVESDDDA

Sequences:

>Translated_110_residues
MDVIQVIKDQIEKNPVILYMKGSPQFPQCGFSAQVVEAMTAVGKPFAYVNILEAPEIRQNLKEYANWPTYPQLWVGGELV
GGCDIIMDMYRSGQLKEMVDGVAVESDDDA
>Mature_110_residues
MDVIQVIKDQIEKNPVILYMKGSPQFPQCGFSAQVVEAMTAVGKPFAYVNILEAPEIRQNLKEYANWPTYPQLWVGGELV
GGCDIIMDMYRSGQLKEMVDGVAVESDDDA

Specific function: Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters [H]

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=97, Percent_Identity=43.298969072165, Blast_Score=103, Evalue=2e-23,
Organism=Homo sapiens, GI95113651, Length=89, Percent_Identity=48.314606741573, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787943, Length=103, Percent_Identity=57.2815533980583, Blast_Score=140, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17556042, Length=90, Percent_Identity=38.8888888888889, Blast_Score=86, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71988159, Length=97, Percent_Identity=38.1443298969072, Blast_Score=86, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71988153, Length=97, Percent_Identity=38.1443298969072, Blast_Score=85, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6325198, Length=102, Percent_Identity=45.0980392156863, Blast_Score=109, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320303, Length=74, Percent_Identity=48.6486486486487, Blast_Score=86, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6321022, Length=78, Percent_Identity=44.8717948717949, Blast_Score=86, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24642023, Length=97, Percent_Identity=41.2371134020619, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19921242, Length=95, Percent_Identity=40, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12244; Mature: 12244

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIQVIKDQIEKNPVILYMKGSPQFPQCGFSAQVVEAMTAVGKPFAYVNILEAPEIRQN
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH
LKEYANWPTYPQLWVGGELVGGCDIIMDMYRSGQLKEMVDGVAVESDDDA
HHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDVIQVIKDQIEKNPVILYMKGSPQFPQCGFSAQVVEAMTAVGKPFAYVNILEAPEIRQN
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH
LKEYANWPTYPQLWVGGELVGGCDIIMDMYRSGQLKEMVDGVAVESDDDA
HHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]