| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is groES
Identifier: 110833494
GI number: 110833494
Start: 699261
End: 699551
Strand: Direct
Name: groES
Synonym: ABO_0633
Alternate gene names: 110833494
Gene position: 699261-699551 (Clockwise)
Preceding gene: 110833484
Following gene: 110833495
Centisome position: 22.41
GC content: 55.33
Gene sequence:
>291_bases ATGAGCATCCGTCCTTTGCATGATCGCGTGCTGGTTCGCCGTGAAGAGGAAGAAACCAAATCTGCTGGCGGTATTGTGCT GCCTGGTTCCGCTGCCGAGAAGCCGTCCCGTGGTGAAGTTATCGCCGTTGGCAATGGCAAAATCACCGAAAATGGCGATG TGCGTCCGCTGGACGTAAAAGCCGGTGATACGGTGATCTTCGGCCAATACTCCGGCAGCACCGTGAAGGTGGAAGGCGAA GAGCTGCTGATCATGAGCGAAGCTGAAATTCTGGCCGTCGTCGAAGACTAA
Upstream 100 bases:
>100_bases ATGATTAGCACTCCACTCATGAGAGTGCTAATTCTGACTATTGAGTCCGGCCATTGTGCCGACTCGGGTGTCGAAGAACT AACTGGGAGTTTAAGGAAAA
Downstream 100 bases:
>100_bases GTTGCGAAGGCCAAGGGTTGCAAGGCTCAGCGCTTAAGGCGAATAGCCAGGGTAACCCAGTTCCGCTCCAGACAGACATC GAACGCCCGCAAGGGCATTC
Product: chaperonin, 10 kDa
Products: NA
Alternate protein names: GroES protein; Protein Cpn10
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVKVEGE ELLIMSEAEILAVVED
Sequences:
>Translated_96_residues MSIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVKVEGE ELLIMSEAEILAVVED >Mature_95_residues SIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVKVEGEE LLIMSEAEILAVVED
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family
Homologues:
Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=67.7083333333333, Blast_Score=129, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17555568, Length=94, Percent_Identity=40.4255319148936, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324594, Length=92, Percent_Identity=44.5652173913043, Blast_Score=74, Evalue=6e-15, Organism=Drosophila melanogaster, GI21356029, Length=97, Percent_Identity=42.2680412371134, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): CH10_ALCBS (Q0VRW7)
Other databases:
- EMBL: AM286690 - RefSeq: YP_692353.1 - ProteinModelPortal: Q0VRW7 - SMR: Q0VRW7 - STRING: Q0VRW7 - GeneID: 4212356 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_0633 - NMPDR: fig|393595.12.peg.633 - eggNOG: COG0234 - HOGENOM: HBG703377 - OMA: IILALSE - PhylomeDB: Q0VRW7 - BioCyc: ABOR393595:ABO_0633-MONOMER - GO: GO:0005737 - HAMAP: MF_00580 - InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 - Gene3D: G3DSA:2.30.33.40 - PANTHER: PTHR10772 - PRINTS: PR00297 - SMART: SM00883
Pfam domain/function: PF00166 Cpn10; SSF50129 GroES_like
EC number: NA
Molecular weight: Translated: 10218; Mature: 10086
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVK CCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCEECCCCCEEEEEEC AGDTVIFGQYSGSTVKVEGEELLIMSEAEILAVVED CCCEEEEEECCCCEEEECCCEEEEEECCEEEEEEEC >Mature Secondary Structure SIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVK CCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCEECCCCCEEEEEEC AGDTVIFGQYSGSTVKVEGEELLIMSEAEILAVVED CCCEEEEEECCCCEEEECCCEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA