Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yqeY [H]

Identifier: 110679251

GI number: 110679251

Start: 1877051

End: 1877509

Strand: Direct

Name: yqeY [H]

Synonym: RD1_1964

Alternate gene names: 110679251

Gene position: 1877051-1877509 (Clockwise)

Preceding gene: 110679248

Following gene: 110679252

Centisome position: 45.42

GC content: 58.61

Gene sequence:

>459_bases
ATGGACTTGCGCACGAAGGTTTCGACCGCGTTGAAACAGGCGATGAAAGACAAGGCAGCGGATCGTCTGTCGACGCTGCG
CCTTATCAACGCGGCAATCAAGGACAAGGATATTGCCGCGCGCGCTGTCGGCAATGACGAGGGCGTGGGCGATGCAGAAG
TTCTCGCGATCCTTGGGAAAATGTCAAAACAGCGTCTCGAAAGCGCGCGCGCCTACGAAGAGGGCGGGCGCCTTGACCTC
GCAGAGCGGGAACGTCAGGAAGTCACGGTTATCGAGGAATTCTTGCCGCAACAGCTGTCCGACGAAGAGGCTGCCGCGGC
TGTGGATGCGGCGATTGCCGAGATAGGAGCCGAAAGTATCCGTGACATGGGCAAGGTCATGGGCGCGCTCAAGGCCAAGT
ACACTGGCCAGATGGATTTCGGGAAGATTGGCCCGACTGTCAAAGAGCGTTTGAGCTGA

Upstream 100 bases:

>100_bases
GTGTTGCGGCGCCGCCGGGCTTTGGGTAATGTCTGCGACTTACCGCGCCTTTCCTGCAACCGGATTACTGGCGCAGGACA
GTCAAAAAGGAATGTGAGCG

Downstream 100 bases:

>100_bases
TCAGCTTTTTATCCGAGATGGTCGAACCCCCACGATCTGCTTTGCGCGGCGCAGCAGCTTTTTACAGGGTAACGGCTTGA
TCTGTGCGTGTACAGGTTTC

Product: GatB/Yqey family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDLRTKVSTALKQAMKDKAADRLSTLRLINAAIKDKDIAARAVGNDEGVGDAEVLAILGKMSKQRLESARAYEEGGRLDL
AERERQEVTVIEEFLPQQLSDEEAAAAVDAAIAEIGAESIRDMGKVMGALKAKYTGQMDFGKIGPTVKERLS

Sequences:

>Translated_152_residues
MDLRTKVSTALKQAMKDKAADRLSTLRLINAAIKDKDIAARAVGNDEGVGDAEVLAILGKMSKQRLESARAYEEGGRLDL
AERERQEVTVIEEFLPQQLSDEEAAAAVDAAIAEIGAESIRDMGKVMGALKAKYTGQMDFGKIGPTVKERLS
>Mature_152_residues
MDLRTKVSTALKQAMKDKAADRLSTLRLINAAIKDKDIAARAVGNDEGVGDAEVLAILGKMSKQRLESARAYEEGGRLDL
AERERQEVTVIEEFLPQQLSDEEAAAAVDAAIAEIGAESIRDMGKVMGALKAKYTGQMDFGKIGPTVKERLS

Specific function: Unknown

COG id: COG1610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003789
- InterPro:   IPR023168
- InterPro:   IPR019004 [H]

Pfam domain/function: PF09424 YqeY [H]

EC number: NA

Molecular weight: Translated: 16421; Mature: 16421

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRTKVSTALKQAMKDKAADRLSTLRLINAAIKDKDIAARAVGNDEGVGDAEVLAILGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
MSKQRLESARAYEEGGRLDLAERERQEVTVIEEFLPQQLSDEEAAAAVDAAIAEIGAESI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RDMGKVMGALKAKYTGQMDFGKIGPTVKERLS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MDLRTKVSTALKQAMKDKAADRLSTLRLINAAIKDKDIAARAVGNDEGVGDAEVLAILGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
MSKQRLESARAYEEGGRLDLAERERQEVTVIEEFLPQQLSDEEAAAAVDAAIAEIGAESI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RDMGKVMGALKAKYTGQMDFGKIGPTVKERLS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9023197 [H]