| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is mnmG
Identifier: 110635799
GI number: 110635799
Start: 3746477
End: 3748345
Strand: Reverse
Name: mnmG
Synonym: Meso_3471
Alternate gene names: 110635799
Gene position: 3748345-3746477 (Counterclockwise)
Preceding gene: 110635800
Following gene: 110635798
Centisome position: 84.95
GC content: 57.52
Gene sequence:
>1869_bases ATGATTCATAAATTCGATGTCGTTGTGGTTGGTGGAGGCCACGCCGGTTGTGAGGCAGCGGCGGCGGCTGCTCGGGCCGG CGCAAGGACAGCGCTTGTCACAATGCGGCGCGATACGATCGGCGTAATGTCCTGCAATCCCGCAATCGGCGGGATCGGCA AGGGACAGCTGGTGCGCGAAGTCGATGCCTTGGATGGCCTCATGGGGCGGGTTGCCGATGCAGCTGGAATCCAGTTCCGT CTCTTGAATCGGCGCAAGGGGCCAGCGGTGCGAGGGCCACGAACGCAGGCGGATCGCAAACTTTACCGCCAGGCTATGCA GGCCGTCATTTCCGAACAAGAGAATCTTCAGGTTATCGAAGCTGAAGTGCATACGCTGGGAATGGAACATGGCCGAATCA CGCATGTCGGCCTCTCCGGAGACTCGCAGATCAACTGCGCGGCTGTAGTCCTGACGACGGGAACCTTTTTGCGCGGATTG ATCCATATTGGCCAGAAGAAAATTCCTGCTGGCCGGGTCAATGAACCGGCTGCGAAGGGTCTTTCGGCTTCCATGGAGGC GGCTGGCTTTAAACTTGGACGACTGAAGACCGGGACGCCCCCTCGCCTCGATGGGCGGACGATCGAATGGAACATGCTCG GATTTCAGAAAGCAGATGAGGATCCGGTTCCGTTTTCACTGCTGAGCGAAAAAATCCAAAACCCGCAAATCACATGTGGA ATAACGCGAACGACAACGGACACGCACCGTATCATTCAAGAGAACCTCGACAAATCCGCAATGTATTCTGGCCAGATTGA GGGAATTGGGCCGCGTTACTGTCCCTCGATCGAGGATAAGATCGTGAAGTTTGGGGAGAGGGACGGTCACCAGATTTTTC TTGAGCCCGAGGGGCTCGATGACCACACCGTGTATCCAAATGGCCTCTCGACCTCGCTGCCTGAAGAGGTTCAGCACGCA TTTCTTAAGACAATACCCGGACTCGCCAACGCGCACGTGCTGCAGCCGGGATATGCCATCGAGTATGATCACGTGGATCC GCGCGAGCTTGAGCCGTCGCTTGAAACGCGTCGCGTCAGGGGTTTATTTCTTGCCGGGCAGATCAATGGCACGACCGGTT ACGAGGAAGCTGCCGCTCAGGGCGTAATTGCCGGCATCAATGCAGCAAGCGTTGCATCGGGGAGCACGACTGTCGTTCCG AGCCGAACCGATGCCTATATCGGTGTCATGATCGATGACCTGGTCACACGGGGAGTGACCGAACCCTACCGCATGTTCAC ATCCCGTGCTGAGTTCCGACTGTCTCTCAGGGCCGACAATGCTGACGAGCGGCTCACGCCGCGGGCGATTGAGTGGGGTG TGGCCTCGAAGGTGCGGCGCGATCGTTTCTATAAAGCAGAACAAGAACTTAGCGATGCGCGGGAACTTACGAAGGCACGC GGACTAACGCCCAATGAGGCAGCCCGTCACGGAATTGCCGTCAATCAGGATGGGGTTCGGCGAAGTGCGTATGACCTGCT TTCGTTCGCCGACATCAACATAGAAAGGCTGAAGGCGATCTGGCCGGAACTTGGTTCCATTGCCCCCAAAACTTGTGAAC GCCTGGAGACAGAGGCTCGTTACGCGGTATACCTTGATCGCCAAGTCGCCGACGCGGAGCGAGTTCGCCGCGAAGAGGGC AGGTCAATTCCCGACGGGATTGATTTCGATTCGGTTCCCGGCCTGTCGAACGAGTTGAAGTATAAGCTTCGTCAACGCAG ACCGCGCACCTTAGCCGAGGCGCAGCGAATCGATGGAATGACCCCCGCCGCCCTGGCCCTCATTTTGGTTGCTATTCGAC AAGGTGAGAAGATTCGGGGCGCTGCATGA
Upstream 100 bases:
>100_bases AACAGCAATCCATGCGCCGCTGCCGTTTCACGTGAAACAGAGCCCGTCTTGACTAAACAGACCGATACGCTCATCTGGAG CGAATGTTGGAAAGAGCCAG
Downstream 100 bases:
>100_bases TGGCGGAGCGGTTCTCTGCCCTGCAGGCTGTCGCTGGCCCGGTTTCACGTGAAACATTTGACGGGTTAGTGGCTTTTGAA GGCGAGTTTAGGAAGTGGTC
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MIHKFDVVVVGGGHAGCEAAAAAARAGARTALVTMRRDTIGVMSCNPAIGGIGKGQLVREVDALDGLMGRVADAAGIQFR LLNRRKGPAVRGPRTQADRKLYRQAMQAVISEQENLQVIEAEVHTLGMEHGRITHVGLSGDSQINCAAVVLTTGTFLRGL IHIGQKKIPAGRVNEPAAKGLSASMEAAGFKLGRLKTGTPPRLDGRTIEWNMLGFQKADEDPVPFSLLSEKIQNPQITCG ITRTTTDTHRIIQENLDKSAMYSGQIEGIGPRYCPSIEDKIVKFGERDGHQIFLEPEGLDDHTVYPNGLSTSLPEEVQHA FLKTIPGLANAHVLQPGYAIEYDHVDPRELEPSLETRRVRGLFLAGQINGTTGYEEAAAQGVIAGINAASVASGSTTVVP SRTDAYIGVMIDDLVTRGVTEPYRMFTSRAEFRLSLRADNADERLTPRAIEWGVASKVRRDRFYKAEQELSDARELTKAR GLTPNEAARHGIAVNQDGVRRSAYDLLSFADINIERLKAIWPELGSIAPKTCERLETEARYAVYLDRQVADAERVRREEG RSIPDGIDFDSVPGLSNELKYKLRQRRPRTLAEAQRIDGMTPAALALILVAIRQGEKIRGAA
Sequences:
>Translated_622_residues MIHKFDVVVVGGGHAGCEAAAAAARAGARTALVTMRRDTIGVMSCNPAIGGIGKGQLVREVDALDGLMGRVADAAGIQFR LLNRRKGPAVRGPRTQADRKLYRQAMQAVISEQENLQVIEAEVHTLGMEHGRITHVGLSGDSQINCAAVVLTTGTFLRGL IHIGQKKIPAGRVNEPAAKGLSASMEAAGFKLGRLKTGTPPRLDGRTIEWNMLGFQKADEDPVPFSLLSEKIQNPQITCG ITRTTTDTHRIIQENLDKSAMYSGQIEGIGPRYCPSIEDKIVKFGERDGHQIFLEPEGLDDHTVYPNGLSTSLPEEVQHA FLKTIPGLANAHVLQPGYAIEYDHVDPRELEPSLETRRVRGLFLAGQINGTTGYEEAAAQGVIAGINAASVASGSTTVVP SRTDAYIGVMIDDLVTRGVTEPYRMFTSRAEFRLSLRADNADERLTPRAIEWGVASKVRRDRFYKAEQELSDARELTKAR GLTPNEAARHGIAVNQDGVRRSAYDLLSFADINIERLKAIWPELGSIAPKTCERLETEARYAVYLDRQVADAERVRREEG RSIPDGIDFDSVPGLSNELKYKLRQRRPRTLAEAQRIDGMTPAALALILVAIRQGEKIRGAA >Mature_622_residues MIHKFDVVVVGGGHAGCEAAAAAARAGARTALVTMRRDTIGVMSCNPAIGGIGKGQLVREVDALDGLMGRVADAAGIQFR LLNRRKGPAVRGPRTQADRKLYRQAMQAVISEQENLQVIEAEVHTLGMEHGRITHVGLSGDSQINCAAVVLTTGTFLRGL IHIGQKKIPAGRVNEPAAKGLSASMEAAGFKLGRLKTGTPPRLDGRTIEWNMLGFQKADEDPVPFSLLSEKIQNPQITCG ITRTTTDTHRIIQENLDKSAMYSGQIEGIGPRYCPSIEDKIVKFGERDGHQIFLEPEGLDDHTVYPNGLSTSLPEEVQHA FLKTIPGLANAHVLQPGYAIEYDHVDPRELEPSLETRRVRGLFLAGQINGTTGYEEAAAQGVIAGINAASVASGSTTVVP SRTDAYIGVMIDDLVTRGVTEPYRMFTSRAEFRLSLRADNADERLTPRAIEWGVASKVRRDRFYKAEQELSDARELTKAR GLTPNEAARHGIAVNQDGVRRSAYDLLSFADINIERLKAIWPELGSIAPKTCERLETEARYAVYLDRQVADAERVRREEG RSIPDGIDFDSVPGLSNELKYKLRQRRPRTLAEAQRIDGMTPAALALILVAIRQGEKIRGAA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=638, Percent_Identity=45.141065830721, Blast_Score=497, Evalue=1e-140, Organism=Homo sapiens, GI19882217, Length=663, Percent_Identity=43.4389140271493, Blast_Score=483, Evalue=1e-136, Organism=Homo sapiens, GI183227703, Length=678, Percent_Identity=42.4778761061947, Blast_Score=477, Evalue=1e-134, Organism=Escherichia coli, GI2367273, Length=628, Percent_Identity=48.4076433121019, Blast_Score=573, Evalue=1e-164, Organism=Caenorhabditis elegans, GI17534255, Length=628, Percent_Identity=44.7452229299363, Blast_Score=515, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6321202, Length=621, Percent_Identity=46.2157809983897, Blast_Score=542, Evalue=1e-155, Organism=Drosophila melanogaster, GI24658174, Length=630, Percent_Identity=48.2539682539683, Blast_Score=521, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_MESSB (Q11CN3)
Other databases:
- EMBL: CP000390 - RefSeq: YP_676007.1 - ProteinModelPortal: Q11CN3 - SMR: Q11CN3 - STRING: Q11CN3 - GeneID: 4179879 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_3471 - NMPDR: fig|266779.1.peg.1062 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: Q11CN3 - ProtClustDB: PRK05192 - BioCyc: MSP266779:MESO_3471-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 67858; Mature: 67858
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHKFDVVVVGGGHAGCEAAAAAARAGARTALVTMRRDTIGVMSCNPAIGGIGKGQLVRE CCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCCHHHHH VDALDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYRQAMQAVISEQENLQVIE HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE AEVHTLGMEHGRITHVGLSGDSQINCAAVVLTTGTFLRGLIHIGQKKIPAGRVNEPAAKG HHHHHHCCCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHC LSASMEAAGFKLGRLKTGTPPRLDGRTIEWNMLGFQKADEDPVPFSLLSEKIQNPQITCG CCHHHHHCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEE ITRTTTDTHRIIQENLDKSAMYSGQIEGIGPRYCPSIEDKIVKFGERDGHQIFLEPEGLD EEECCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCC DHTVYPNGLSTSLPEEVQHAFLKTIPGLANAHVLQPGYAIEYDHVDPRELEPSLETRRVR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCHHHCCCCHHHHHEE GLFLAGQINGTTGYEEAAAQGVIAGINAASVASGSTTVVPSRTDAYIGVMIDDLVTRGVT EEEEEEEECCCCCHHHHHHCCEEECCCHHHCCCCCEEEECCCCCCEEHHHHHHHHHHCCC EPYRMFTSRAEFRLSLRADNADERLTPRAIEWGVASKVRRDRFYKAEQELSDARELTKAR HHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLTPNEAARHGIAVNQDGVRRSAYDLLSFADINIERLKAIWPELGSIAPKTCERLETEAR CCCCCHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCE YAVYLDRQVADAERVRREEGRSIPDGIDFDSVPGLSNELKYKLRQRRPRTLAEAQRIDGM EEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC TPAALALILVAIRQGEKIRGAA CHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIHKFDVVVVGGGHAGCEAAAAAARAGARTALVTMRRDTIGVMSCNPAIGGIGKGQLVRE CCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCCHHHHH VDALDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRKLYRQAMQAVISEQENLQVIE HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE AEVHTLGMEHGRITHVGLSGDSQINCAAVVLTTGTFLRGLIHIGQKKIPAGRVNEPAAKG HHHHHHCCCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHC LSASMEAAGFKLGRLKTGTPPRLDGRTIEWNMLGFQKADEDPVPFSLLSEKIQNPQITCG CCHHHHHCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEE ITRTTTDTHRIIQENLDKSAMYSGQIEGIGPRYCPSIEDKIVKFGERDGHQIFLEPEGLD EEECCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCC DHTVYPNGLSTSLPEEVQHAFLKTIPGLANAHVLQPGYAIEYDHVDPRELEPSLETRRVR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCHHHCCCCHHHHHEE GLFLAGQINGTTGYEEAAAQGVIAGINAASVASGSTTVVPSRTDAYIGVMIDDLVTRGVT EEEEEEEECCCCCHHHHHHCCEEECCCHHHCCCCCEEEECCCCCCEEHHHHHHHHHHCCC EPYRMFTSRAEFRLSLRADNADERLTPRAIEWGVASKVRRDRFYKAEQELSDARELTKAR HHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLTPNEAARHGIAVNQDGVRRSAYDLLSFADINIERLKAIWPELGSIAPKTCERLETEAR CCCCCHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCE YAVYLDRQVADAERVRREEGRSIPDGIDFDSVPGLSNELKYKLRQRRPRTLAEAQRIDGM EEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC TPAALALILVAIRQGEKIRGAA CHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA