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The map label for this gene is gidB

Identifier: 110635798

GI number: 110635798

Start: 3745848

End: 3746480

Strand: Reverse

Name: gidB

Synonym: Meso_3470

Alternate gene names: 110635798

Gene position: 3746480-3745848 (Counterclockwise)

Preceding gene: 110635799

Following gene: 110635797

Centisome position: 84.91

GC content: 54.82

Gene sequence:

>633_bases
ATGATGGCGGAGCGGTTCTCTGCCCTGCAGGCTGTCGCTGGCCCGGTTTCACGTGAAACATTTGACGGGTTAGTGGCTTT
TGAAGGCGAGTTTAGGAAGTGGTCTGCGCGAATCAACTTAACAGCCCCTTCAACGCTGCCGCACCTGTGGGAGCGTCACA
TTCTCGATAGCGCTCAGCTGATTCGCATCGCGCCGGCGGCCAGGCGATGGCTGGATTTGGGATCTGGGGGAGGCTTTCCG
GGTGCGGTTATTGCAATTTTGATGAAGGAACATGCTCCAGCTCAAGTTGATCTGGTAGAGAGCAATCGCAAAAAAGCAGC
GTTTCTACAGACCAGCCTCGCGTCGCTAAAAGCGCCTTGTATGATCCATCCTCAACGAATTGAGGATTGCTATGGCCAAA
TTCCTCCCCCTGAGGTGATCACGGCTAGGGCTCTTGCTCCCCTGCCTGTGCTTTTTGGATTGGCGGAGCCATGGATGAAA
GCCGGCGCGCGCGCTTTGCTTCATAAAGGCCGGGATTACCGCCGTGAAATTGAAGAAAGCCGTGACGCTTGGGGATTCAA
TCTGTTAGAACATGGCAATGAGGTCGGGGGCGACGGCGTGATTCTTGAAATAAGCGATCTTCGCCGCCTCTAA

Upstream 100 bases:

>100_bases
GCACCTTAGCCGAGGCGCAGCGAATCGATGGAATGACCCCCGCCGCCCTGGCCCTCATTTTGGTTGCTATTCGACAAGGT
GAGAAGATTCGGGGCGCTGC

Downstream 100 bases:

>100_bases
CGACTGCTGGTTCTTGGTGTTTTTGATTGGCAGGGGCCTATGAGCAAGCCTTCACGCATCATCACCGTGGCGAATCAGAA
AGGTGGTGTAGGAAAGACCA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MMAERFSALQAVAGPVSRETFDGLVAFEGEFRKWSARINLTAPSTLPHLWERHILDSAQLIRIAPAARRWLDLGSGGGFP
GAVIAILMKEHAPAQVDLVESNRKKAAFLQTSLASLKAPCMIHPQRIEDCYGQIPPPEVITARALAPLPVLFGLAEPWMK
AGARALLHKGRDYRREIEESRDAWGFNLLEHGNEVGGDGVILEISDLRRL

Sequences:

>Translated_210_residues
MMAERFSALQAVAGPVSRETFDGLVAFEGEFRKWSARINLTAPSTLPHLWERHILDSAQLIRIAPAARRWLDLGSGGGFP
GAVIAILMKEHAPAQVDLVESNRKKAAFLQTSLASLKAPCMIHPQRIEDCYGQIPPPEVITARALAPLPVLFGLAEPWMK
AGARALLHKGRDYRREIEESRDAWGFNLLEHGNEVGGDGVILEISDLRRL
>Mature_210_residues
MMAERFSALQAVAGPVSRETFDGLVAFEGEFRKWSARINLTAPSTLPHLWERHILDSAQLIRIAPAARRWLDLGSGGGFP
GAVIAILMKEHAPAQVDLVESNRKKAAFLQTSLASLKAPCMIHPQRIEDCYGQIPPPEVITARALAPLPVLFGLAEPWMK
AGARALLHKGRDYRREIEESRDAWGFNLLEHGNEVGGDGVILEISDLRRL

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_MESSB (Q11CN4)

Other databases:

- EMBL:   CP000390
- RefSeq:   YP_676006.1
- ProteinModelPortal:   Q11CN4
- SMR:   Q11CN4
- STRING:   Q11CN4
- GeneID:   4179878
- GenomeReviews:   CP000390_GR
- KEGG:   mes:Meso_3470
- eggNOG:   COG0357
- HOGENOM:   HBG686577
- OMA:   HCRIEDV
- ProtClustDB:   PRK00107
- BioCyc:   MSP266779:MESO_3470-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: =2.1.1.170

Molecular weight: Translated: 23177; Mature: 23177

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAERFSALQAVAGPVSRETFDGLVAFEGEFRKWSARINLTAPSTLPHLWERHILDSAQL
CCHHHHHHHHHHHCCCCHHHHCCEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHCCHHH
IRIAPAARRWLDLGSGGGFPGAVIAILMKEHAPAQVDLVESNRKKAAFLQTSLASLKAPC
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
MIHPQRIEDCYGQIPPPEVITARALAPLPVLFGLAEPWMKAGARALLHKGRDYRREIEES
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RDAWGFNLLEHGNEVGGDGVILEISDLRRL
HCCCCHHHHHCCCCCCCCEEEEEHHCCCCC
>Mature Secondary Structure
MMAERFSALQAVAGPVSRETFDGLVAFEGEFRKWSARINLTAPSTLPHLWERHILDSAQL
CCHHHHHHHHHHHCCCCHHHHCCEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHCCHHH
IRIAPAARRWLDLGSGGGFPGAVIAILMKEHAPAQVDLVESNRKKAAFLQTSLASLKAPC
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
MIHPQRIEDCYGQIPPPEVITARALAPLPVLFGLAEPWMKAGARALLHKGRDYRREIEES
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RDAWGFNLLEHGNEVGGDGVILEISDLRRL
HCCCCHHHHHCCCCCCCCEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA