| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is acoA [H]
Identifier: 110634612
GI number: 110634612
Start: 2419455
End: 2420582
Strand: Direct
Name: acoA [H]
Synonym: Meso_2266
Alternate gene names: 110634612
Gene position: 2419455-2420582 (Clockwise)
Preceding gene: 110634611
Following gene: 110634613
Centisome position: 54.83
GC content: 64.36
Gene sequence:
>1128_bases ATGGCGGGCGCAGCCGTGTCCTTCGGCACCACGCTCGCACGGGCAAACGGCGAGATCGGTTTTTGGGCAAAGGACCTTTC GGACCAGCAGCTCGTCGACATGTTCACGACCATCCTGCGCATCCGTTGGCACGAGCGCACCATGGCCGACAAGATGCTGA CGGACCCGAACTATCGCGGCTACAACCACTTCTACGCGGGCCAGGAGGCAGTCGCCGTCGGCGTCTGCTCAGCGCTGCGC AACTCCGGCGGCGTGATGCATGCCGATCTGGCCTATTCGACGCACCGGCCGACCGGCCATGCGATCGCCAAAGGCGTGGA CATGAAGCTGATGGCGGCGGAGAACGACTTCCGCGCCACCGGCCTCAACGGCGGCTATGCGGCCGAAATGCACCTCTGCG ATCCGGAAGTGGGCTTCATAGGCGCGGACGGCATGATCGGTCCGGGCCCGGTGATCGCCAGCGGCTCCGCCTTCGCCATC AAGGCGCGCGGCAGCGACCAGGTGGTGGTGAATTTCGGTGGTGACGGCACCTATGCGACACCGCATTTTCACTCGACGCT GAACAACGCCGCACTGTTGAAGCTGCCCTTCATCTACGTGCTGGAGAACAACCTCTATCACCAGTATGCGCACTACTCCT ATTCGTGCCCGCTGAAGGACATTGCGGATGCCGCGAACACCTACGGCATTCCCGGCATCGTCGTGGACGGGCAGGATGTG ATCCAGGTCTACAATGCCGCCAAGACGGCCGTCGACCGGGCGAGGGCTGGCGAAGGGCCGACGCTGATCGAGGCCAAGAC CTATCGCTACTACAACCATTGGGGTGCGCCCGGCGCCAAGCCCGGCGAGCTCGGCGCCTTCGGTTACGATCCGCTTGCCA TCTCTTCCTTCCGGCCGGAGCGGGAGCTGCGCTCCTGGATGCAACGCGACCCCGTCAGGATCGCTCACGACATCCTCGTC AATTGGGGCGTGATCGACCATGCCAAGGCCGCCGAGATCGAAGCTTCGGTGAAGCAGGACGTCGCGGACGCCTTCGCCTG GGCGGCTGAGCAGCCCCTCTGCAAGGCGGAAGACGGGCTGAAGAACGTCTTCGTCGAAGGCACCGTCGAGGCGCGCCAGT TCGGTTGA
Upstream 100 bases:
>100_bases AGACGATGTCATGCATGACAATCCAGATCGCAAGTCGGACGGTGACGAGCACATTTCTCCGCTTGGAACCTCGCGCCGGA GCTTCTTGAAGGCCGCCGCC
Downstream 100 bases:
>100_bases GAGGCGACGTCGGCAGGTCCGGTCTCCCTCTCCCTGGCAGCAATTGGAAAGGTACGTGAAATGGCACGCAAAAGCTGGAT GTACTCGGTCCTTGAGGCCG
Product: twin-arginine translocation pathway signal
Products: [dihydrolipoyllysine-residue acetyltransferase] ; $S-acetyldihydrolipoyllysine; CO2
Alternate protein names: Acetoin:DCPIP oxidoreductase-alpha; Ao:DCPIP OR; TPP-dependent acetoin dehydrogenase E1 subunit alpha [H]
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAGAAVSFGTTLARANGEIGFWAKDLSDQQLVDMFTTILRIRWHERTMADKMLTDPNYRGYNHFYAGQEAVAVGVCSALR NSGGVMHADLAYSTHRPTGHAIAKGVDMKLMAAENDFRATGLNGGYAAEMHLCDPEVGFIGADGMIGPGPVIASGSAFAI KARGSDQVVVNFGGDGTYATPHFHSTLNNAALLKLPFIYVLENNLYHQYAHYSYSCPLKDIADAANTYGIPGIVVDGQDV IQVYNAAKTAVDRARAGEGPTLIEAKTYRYYNHWGAPGAKPGELGAFGYDPLAISSFRPERELRSWMQRDPVRIAHDILV NWGVIDHAKAAEIEASVKQDVADAFAWAAEQPLCKAEDGLKNVFVEGTVEARQFG
Sequences:
>Translated_375_residues MAGAAVSFGTTLARANGEIGFWAKDLSDQQLVDMFTTILRIRWHERTMADKMLTDPNYRGYNHFYAGQEAVAVGVCSALR NSGGVMHADLAYSTHRPTGHAIAKGVDMKLMAAENDFRATGLNGGYAAEMHLCDPEVGFIGADGMIGPGPVIASGSAFAI KARGSDQVVVNFGGDGTYATPHFHSTLNNAALLKLPFIYVLENNLYHQYAHYSYSCPLKDIADAANTYGIPGIVVDGQDV IQVYNAAKTAVDRARAGEGPTLIEAKTYRYYNHWGAPGAKPGELGAFGYDPLAISSFRPERELRSWMQRDPVRIAHDILV NWGVIDHAKAAEIEASVKQDVADAFAWAAEQPLCKAEDGLKNVFVEGTVEARQFG >Mature_374_residues AGAAVSFGTTLARANGEIGFWAKDLSDQQLVDMFTTILRIRWHERTMADKMLTDPNYRGYNHFYAGQEAVAVGVCSALRN SGGVMHADLAYSTHRPTGHAIAKGVDMKLMAAENDFRATGLNGGYAAEMHLCDPEVGFIGADGMIGPGPVIASGSAFAIK ARGSDQVVVNFGGDGTYATPHFHSTLNNAALLKLPFIYVLENNLYHQYAHYSYSCPLKDIADAANTYGIPGIVVDGQDVI QVYNAAKTAVDRARAGEGPTLIEAKTYRYYNHWGAPGAKPGELGAFGYDPLAISSFRPERELRSWMQRDPVRIAHDILVN WGVIDHAKAAEIEASVKQDVADAFAWAAEQPLCKAEDGLKNVFVEGTVEARQFG
Specific function: Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde. The alpha subunit is probably the catalytic subunit of the enzyme [H]
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885543, Length=328, Percent_Identity=30.1829268292683, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI4505685, Length=325, Percent_Identity=28.3076923076923, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI291084742, Length=325, Percent_Identity=28.3076923076923, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI291084744, Length=332, Percent_Identity=27.710843373494, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI291084757, Length=325, Percent_Identity=26.1538461538462, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI11386135, Length=334, Percent_Identity=26.9461077844311, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI258645172, Length=334, Percent_Identity=26.9461077844311, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI32564172, Length=301, Percent_Identity=27.5747508305648, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17536047, Length=301, Percent_Identity=27.5747508305648, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI86563355, Length=360, Percent_Identity=26.3888888888889, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI86563357, Length=360, Percent_Identity=26.3888888888889, Blast_Score=101, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6321026, Length=347, Percent_Identity=27.9538904899135, Blast_Score=123, Evalue=6e-29, Organism=Drosophila melanogaster, GI24639744, Length=328, Percent_Identity=29.2682926829268, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI28571106, Length=328, Percent_Identity=29.2682926829268, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24639740, Length=328, Percent_Identity=29.2682926829268, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24639746, Length=319, Percent_Identity=29.4670846394984, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24639748, Length=318, Percent_Identity=29.2452830188679, Blast_Score=110, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: 1.2.4.1
Molecular weight: Translated: 40580; Mature: 40449
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAAVSFGTTLARANGEIGFWAKDLSDQQLVDMFTTILRIRWHERTMADKMLTDPNYRG CCCCEEECCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YNHFYAGQEAVAVGVCSALRNSGGVMHADLAYSTHRPTGHAIAKGVDMKLMAAENDFRAT CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHCCCCEEEEEECCCCEEE GLNGGYAAEMHLCDPEVGFIGADGMIGPGPVIASGSAFAIKARGSDQVVVNFGGDGTYAT CCCCCEEEEEEECCCCCCEEECCCCCCCCCEEECCCEEEEEECCCCEEEEEECCCCCEEC PHFHSTLNNAALLKLPFIYVLENNLYHQYAHYSYSCPLKDIADAANTYGIPGIVVDGQDV CHHHHHCCCCEEEEEEEEEEEECCCCHHHHCEEECCCHHHHHHHHHHCCCCEEEECCHHH IQVYNAAKTAVDRARAGEGPTLIEAKTYRYYNHWGAPGAKPGELGAFGYDPLAISSFRPE HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCH RELRSWMQRDPVRIAHDILVNWGVIDHAKAAEIEASVKQDVADAFAWAAEQPLCKAEDGL HHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCH KNVFVEGTVEARQFG HHEEEECEECCCCCC >Mature Secondary Structure AGAAVSFGTTLARANGEIGFWAKDLSDQQLVDMFTTILRIRWHERTMADKMLTDPNYRG CCCEEECCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YNHFYAGQEAVAVGVCSALRNSGGVMHADLAYSTHRPTGHAIAKGVDMKLMAAENDFRAT CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHCCCCEEEEEECCCCEEE GLNGGYAAEMHLCDPEVGFIGADGMIGPGPVIASGSAFAIKARGSDQVVVNFGGDGTYAT CCCCCEEEEEEECCCCCCEEECCCCCCCCCEEECCCEEEEEECCCCEEEEEECCCCCEEC PHFHSTLNNAALLKLPFIYVLENNLYHQYAHYSYSCPLKDIADAANTYGIPGIVVDGQDV CHHHHHCCCCEEEEEEEEEEEECCCCHHHHCEEECCCHHHHHHHHHHCCCCEEEECCHHH IQVYNAAKTAVDRARAGEGPTLIEAKTYRYYNHWGAPGAKPGELGAFGYDPLAISSFRPE HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCH RELRSWMQRDPVRIAHDILVNWGVIDHAKAAEIEASVKQDVADAFAWAAEQPLCKAEDGL HHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCH KNVFVEGTVEARQFG HHEEEECEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pyruvate; [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine
Specific reaction: pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S- $acetyldihydrolipoyllysine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969503; 10368162; 9384377 [H]