| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634611
Identifier: 110634611
GI number: 110634611
Start: 2418772
End: 2419275
Strand: Direct
Name: 110634611
Synonym: Meso_2265
Alternate gene names: NA
Gene position: 2418772-2419275 (Clockwise)
Preceding gene: 110634608
Following gene: 110634612
Centisome position: 54.82
GC content: 63.29
Gene sequence:
>504_bases ATGAAGAAGCCGAGGACCTGGATTCTGGTGGCGGACGGCGCGCAGGCGCGCATCGTGCGCGAATTGGCGTGCGATGGGGA AACCAGGGAACGTCTCGATGATCTCGTCTTCGAGATTGAGCACAAGCCGCTTCGGCGGATCATGGCGGATCGTCCGGGGC GCAGCTTCGAATCCCACGGCGCGCGACGGTCTGCGATGGAATACCGTTCCGATCCGGTTCGCGACCGCCAGAGGCGGTTC GCTTCGATGTTGAGCAAGCATCTTCAGGACCATCACGCCGCCGGCGAGTTCGACCGTCTGGCGGTAGTCGCAGAGCCGCG AATGCTCGGTATCGTTCGGCAGACACTGCCTGCAGCACTGAGGGAAGTGGTCGTCAGTGAGACCGGCAAGGACCTTACGA AACTTCCTGCCGATGAACTTTACGCTGTCCTCGCTGGCATGCCGGCCGCCCCAGCGCCGGCCATACGCGGCCCGAACGGG CGTCCCGTTGATCGGGATCAATGA
Upstream 100 bases:
>100_bases CTCGATGTTGATGCTCATCAAAGCGATTACGCGTGGACCGGCCTTCATGACGCCCACGAAGAAATCTGCAGGTGCAGTCT CTCGCATATGGAGAAAGACG
Downstream 100 bases:
>100_bases GAACTGCGCATTCGAGGTCAATGATTGTTCTTATCGCTCCGGGAATTGGCTGTCAGCAAGCAACCCGGGGAGCACAGGGA GACGATGTCATGCATGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Required For Attachment Host Cells; Host Cell Attachment-Required Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKKPRTWILVADGAQARIVRELACDGETRERLDDLVFEIEHKPLRRIMADRPGRSFESHGARRSAMEYRSDPVRDRQRRF ASMLSKHLQDHHAAGEFDRLAVVAEPRMLGIVRQTLPAALREVVVSETGKDLTKLPADELYAVLAGMPAAPAPAIRGPNG RPVDRDQ
Sequences:
>Translated_167_residues MKKPRTWILVADGAQARIVRELACDGETRERLDDLVFEIEHKPLRRIMADRPGRSFESHGARRSAMEYRSDPVRDRQRRF ASMLSKHLQDHHAAGEFDRLAVVAEPRMLGIVRQTLPAALREVVVSETGKDLTKLPADELYAVLAGMPAAPAPAIRGPNG RPVDRDQ >Mature_167_residues MKKPRTWILVADGAQARIVRELACDGETRERLDDLVFEIEHKPLRRIMADRPGRSFESHGARRSAMEYRSDPVRDRQRRF ASMLSKHLQDHHAAGEFDRLAVVAEPRMLGIVRQTLPAALREVVVSETGKDLTKLPADELYAVLAGMPAAPAPAIRGPNG RPVDRDQ
Specific function: Unknown
COG id: COG5622
COG function: function code N; Protein required for attachment to host cells
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18767; Mature: 18767
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPRTWILVADGAQARIVRELACDGETRERLDDLVFEIEHKPLRRIMADRPGRSFESHG CCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHC ARRSAMEYRSDPVRDRQRRFASMLSKHLQDHHAAGEFDRLAVVAEPRMLGIVRQTLPAAL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH REVVVSETGKDLTKLPADELYAVLAGMPAAPAPAIRGPNGRPVDRDQ HHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKPRTWILVADGAQARIVRELACDGETRERLDDLVFEIEHKPLRRIMADRPGRSFESHG CCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHC ARRSAMEYRSDPVRDRQRRFASMLSKHLQDHHAAGEFDRLAVVAEPRMLGIVRQTLPAAL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH REVVVSETGKDLTKLPADELYAVLAGMPAAPAPAIRGPNGRPVDRDQ HHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA