| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763039
Identifier: 108763039
GI number: 108763039
Start: 2423540
End: 2425156
Strand: Reverse
Name: 108763039
Synonym: MXAN_2091
Alternate gene names: NA
Gene position: 2425156-2423540 (Counterclockwise)
Preceding gene: 108760533
Following gene: 108759341
Centisome position: 26.53
GC content: 69.7
Gene sequence:
>1617_bases ATGAAGACCCGAGCACTCCTGTCCCTCACCGCCCTGCTGGGGCTCGCCGGCTGCGCCACCACGCCCCAGGCGCCGCCTCC CGACGAGAACGCGCCGCCGCCCGCGGTGCCCGCCCAGGCGGCGGCGCCCGAGCCCGCTCCGCAGCCCACGCGTCCGGAGT CCGTGCCCGCGACGCCGCTGCGCCAGCCCAAGCCCATGGAGTTGGTCGTCCTGGCGCGTCCGGACACGCCCATCGTCTCC TTCCGGCTCGTGTTCCACACCGGCTCCGTGGACGACCCGAAGGGCAAGGAGGGCCTCACCGCCCTCACCGCGCAGCTCAT GGCGGAGGGCGGCACGCAGAAGCTTTCGGCCTCGCAGCTCCTGGAGGCCCTGTACCCCATGGCCGCGGAGCTGGACGTCT TCGTGGACAAGGAGCTCACGACGTTCTCCGGCCGCGTCCACAAGGACTTCCTGACGCGCTTCCAGGACATCTTCACCGAC GTGCTCCTGGCTCCGCGCCTGGACAAGGCCGAGCTGGAGCGCCTGCGCGCCAACGCCATCAGCGACGTGGAGAACGGCCT GCGCAGCGCCAATGACGAGGCACTGGGCAAGGTCGCGCTGGACGCCCTGCTCTACCAGGGCCACCCCTACGCGCACTTCA CCGGCGGCACCGTACAGGGCCTGAAGGCGATTACGCTGGACGACGTGAAGGCCCACGCCCAGCGCGTCTTCACGCAGGAC CGGCTCGTCATCGGCCTGGCGGGCGCGGTGGATGACGCGCTCGCACAGGCGCTCAGCTCGCGCCTGTCCGCGTTGCCCGC GAAGGGCGCTCCGCGCGTGGAGCTGCCCGCCGTTCCGACGACGGCCGGCCGCACCGTCATCATCCAGAAGCCCACGCTCT CCACCGCCGTCAGCATGGGCTTTGTCAGCACCATCCGCCGCGGCGACCCGGACTTCTTCCCGGTGGCCTTCGCCATGTCC AACCTGGGCGAGCACCGCCAGTCCATTGGCGTGCTCTTCACCGAGCTGCGCGAGAAGCGCGGCCTCAACTACGGCGACTA CGCCTACGCCGAGCACTTCATCGAGTCGCCCGGCACCACGTACAACCGCACCAACATCGCGCGCACGCAGCAGGACCTGT CCCTGTGGATTCGCCCCGTGGTGCCCACCAACGGCGTGTTCGCCACGCGCGGCGCGGTGTTCTTCCTGGACCAGATGGTG AAGGAGGGCATCCCGCAGGAGCGCTTCGAGCTGATGCGCGGCTTCCTCCAGGGCTACACCCGCCTGTGGGAACAGACGGA CCAACGCCGGCTGGGCTACGCCATTGACGGGCTCTTCTACGGCACGCCCGACTTCCTGGAGCAGTACCGCCAGGCCATGT CGAAAATGACGCCGCAGTCCGTCCAGGAGGCGCTCCGCCGCCGCGTGCAGCCCGAGGCCCTCAACTTCGCCTTCGTCACC GAGGACGCGGAGGGGCTCGCCCAGGCGCTGCGCTCCGGTGCGCCGTCGCCCATCACCTACGCATCACCCAAGTCAGAGGA GTTGCTGACACAGGACCAGGCCATCTCCTCGTCCAAGCTGCCCCTGCGCCCGGAGGCCATCCAGGTCATCCCCGCGCAGC AGTTCATGGAGAAATAA
Upstream 100 bases:
>100_bases CCGCCCAGTTGTCCGACTTCGCCAAGCGCTACCTCACCGCCAACAAGCTCATCCTGCTCAGCCTCACCCCCAAGACGGAC GCCCAGGGAGGGACGAAGTG
Downstream 100 bases:
>100_bases CACACGGCTGTAATCAGCAGTGCCGGGGGGTGGGTCATTTCCTTCCACCCCCCGGAGTCGGGTGCTATGAGCCTGAAACA TGCAAGGCTTCAGCTTGCGT
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPLRQPKPMELVVLARPDTPIVS FRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQLLEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTD VLLAPRLDKAELERLRANAISDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMGFVSTIRRGDPDFFPVAFAMS NLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTTYNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMV KEGIPQERFELMRGFLQGYTRLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK
Sequences:
>Translated_538_residues MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPLRQPKPMELVVLARPDTPIVS FRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQLLEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTD VLLAPRLDKAELERLRANAISDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMGFVSTIRRGDPDFFPVAFAMS NLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTTYNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMV KEGIPQERFELMRGFLQGYTRLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK >Mature_538_residues MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPLRQPKPMELVVLARPDTPIVS FRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQLLEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTD VLLAPRLDKAELERLRANAISDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMGFVSTIRRGDPDFFPVAFAMS NLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTTYNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMV KEGIPQERFELMRGFLQGYTRLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323192, Length=289, Percent_Identity=24.2214532871972, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 58730; Mature: 58730
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RQPKPMELVVLARPDTPIVSFRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQL CCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH LEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTDVLLAPRLDKAELERLRANAI HHHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHCCEEEHHHHHHHHHHHHHHHC RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMG CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHH FVSTIRRGDPDFFPVAFAMSNLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC YNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMVKEGIPQERFELMRGFLQGYT CCCCHHHHHHHHHHHEEEECCCCCCEEHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT HHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEE EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK CCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHHHEECCHHHHHCC >Mature Secondary Structure MKTRALLSLTALLGLAGCATTPQAPPPDENAPPPAVPAQAAAPEPAPQPTRPESVPATPL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RQPKPMELVVLARPDTPIVSFRLVFHTGSVDDPKGKEGLTALTAQLMAEGGTQKLSASQL CCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH LEALYPMAAELDVFVDKELTTFSGRVHKDFLTRFQDIFTDVLLAPRLDKAELERLRANAI HHHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SDVENGLRSANDEALGKVALDALLYQGHPYAHFTGGTVQGLKAITLDDVKAHAQRVFTQD HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHCCEEEHHHHHHHHHHHHHHHC RLVIGLAGAVDDALAQALSSRLSALPAKGAPRVELPAVPTTAGRTVIIQKPTLSTAVSMG CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHH FVSTIRRGDPDFFPVAFAMSNLGEHRQSIGVLFTELREKRGLNYGDYAYAEHFIESPGTT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC YNRTNIARTQQDLSLWIRPVVPTNGVFATRGAVFFLDQMVKEGIPQERFELMRGFLQGYT CCCCHHHHHHHHHHHEEEECCCCCCEEHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLWEQTDQRRLGYAIDGLFYGTPDFLEQYRQAMSKMTPQSVQEALRRRVQPEALNFAFVT HHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEE EDAEGLAQALRSGAPSPITYASPKSEELLTQDQAISSSKLPLRPEAIQVIPAQQFMEK CCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHHHEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]