Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563138

Identifier: 108563138

GI number: 108563138

Start: 751487

End: 752554

Strand: Reverse

Name: 108563138

Synonym: HPAG1_0713

Alternate gene names: NA

Gene position: 752554-751487 (Counterclockwise)

Preceding gene: 108563139

Following gene: 108563137

Centisome position: 47.14

GC content: 33.99

Gene sequence:

>1068_bases
ATGAACCACCTTTTAATCCTTTATAACCCTTACTATCAAAAAGATGTGATCCAACAACATTTAAGCGTTTTACAGGAAAA
ATCCCAAGTGGGCTTTGGTAAAATCCGATCAAAGCTCAACGATCAAGAAAAGCACGACTCTTTAGAAGAGATTTACAAAG
CCACCAATGAAAAAAATTTTTTACAGCTTTTTTTGACCGATTATGCTAATTTATTTGCCGCTAAGGTGATAAAGGTTTCT
AAAGAGATTGATGAGAGTTTGATCCCTAGCTATTATAAAGAAAAAAATTTGGAAGTGGAAGACTTTTTTATTATCAGCGA
TTTAAGGGAATTAGTCAGGGAAGATTTTAGCCTTTTAAGGGATCAATTTTTAGCCAATTTCATTGCGCCAAACAACCACA
CTTACGCCATTTATGGGAATAATTATGTCTATCCTTTGCCGGTGAGGCTAAAAGAAGAGCGTTCTTATTTTTTAGGCGAT
GAAAAGCATTATCTGAGCGTGTATAAAAGCAAAGAATATTTAACCATGCAAGAAAATTTCATGCGTTTTGTTTTTGGCAA
AAGGCTTTTTTACCTCTTACACCCTGATAGCATCAATAACATCATTCATGCAGAGTTAGAGCTTTTACAAAGCGAAAACG
ATCTTTTGAATGATTTTACCAACATCATCGTCAAATACTCCAAAACCTTAGAATACGAAATTTATACTTTTGCTAAACAA
GTTCTTTTAAAGGTTTGCAAAAAAGATCCCAACCTTTATGATTTGGATTATGAAGTCCAAGGAAAAACTTTGATACTTGA
AGATTTCTTCACTCAAAAGCCTAATCTTGGGAGCGTTAAATTTTTACTCAGACACGAAAAAATCCAATACCATTTAGAAG
AAAACTTAAATAGATTCATCAATTATCCTTTTTCAAAAAGCCTAAGCCTCATTCAAAACATCCGCAACGAAGCCGTTCAC
GCAAAAGCTCCAGGTTTGAATGAAGTGGAAAAAATAAGGAATGAAATTTTAGGCATAGAAGGCGCAAGCTTACTCAAAGG
CATTTTAACCCACAAGGAAACTTCATAA

Upstream 100 bases:

>100_bases
ACGAATTGTTTGAAATTTTAAAAGATCTCATCCAAGAATACGAACAAAATCCTGACGAGATCAAGCAAAATCTCAAAGAA
ATCCTAAAATAAGATAGGGC

Downstream 100 bases:

>100_bases
AAGCACCATCAATTCAGCATGCGTTTAACACCGATTTGACAGCGCGAGATTTTAAAACCTATTTAGAGCCTTTAAGAGAG
GGGAAAAATTTATTGGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNFLQLFLTDYANLFAAKVIKVS
KEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLRDQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGD
EKHYLSVYKSKEYLTMQENFMRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ
VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFINYPFSKSLSLIQNIRNEAVH
AKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS

Sequences:

>Translated_355_residues
MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNFLQLFLTDYANLFAAKVIKVS
KEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLRDQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGD
EKHYLSVYKSKEYLTMQENFMRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ
VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFINYPFSKSLSLIQNIRNEAVH
AKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS
>Mature_355_residues
MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNFLQLFLTDYANLFAAKVIKVS
KEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLRDQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGD
EKHYLSVYKSKEYLTMQENFMRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ
VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFINYPFSKSLSLIQNIRNEAVH
AKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41912; Mature: 41912

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNF
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
LQLFLTDYANLFAAKVIKVSKEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGDEKHYLSVYKSKEYLTMQENF
HHHHHHHCCCCCCEEEEECCCEEEECCCEEECCCCHHCCCCHHHHHHHCCCCHHHHHHHH
MRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ
HHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFI
HHHHHHHCCCCEEECEEEECCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NYPFSKSLSLIQNIRNEAVHAKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNHLLILYNPYYQKDVIQQHLSVLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNF
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
LQLFLTDYANLFAAKVIKVSKEIDESLIPSYYKEKNLEVEDFFIISDLRELVREDFSLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DQFLANFIAPNNHTYAIYGNNYVYPLPVRLKEERSYFLGDEKHYLSVYKSKEYLTMQENF
HHHHHHHCCCCCCEEEEECCCEEEECCCEEECCCCHHCCCCHHHHHHHCCCCHHHHHHHH
MRFVFGKRLFYLLHPDSINNIIHAELELLQSENDLLNDFTNIIVKYSKTLEYEIYTFAKQ
HHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLKVCKKDPNLYDLDYEVQGKTLILEDFFTQKPNLGSVKFLLRHEKIQYHLEENLNRFI
HHHHHHHCCCCEEECEEEECCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NYPFSKSLSLIQNIRNEAVHAKAPGLNEVEKIRNEILGIEGASLLKGILTHKETS
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA