Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is nadR [C]

Identifier: 103488605

GI number: 103488605

Start: 3282829

End: 3283347

Strand: Reverse

Name: nadR [C]

Synonym: Sala_3130

Alternate gene names: 103488605

Gene position: 3283347-3282829 (Counterclockwise)

Preceding gene: 103488606

Following gene: 103488604

Centisome position: 98.15

GC content: 70.33

Gene sequence:

>519_bases
ATGACCCGGCACATCTGCCTGCACGGCGCCGAAAGCACGGGCAAGTCGACGCTCGCCCCGCGGCTCGCGCTGCGGCTCGG
CGGGCTGGTCGTCCCCGAATATGGGCGCACCTATGCCGAGGCGAATGGCACCAAGTTCGACGAGGTCGACCTGCTCGCCA
TTTTCGACGGCCACCGCGCCGCGACCGCGGCGGCGCTGGCCCAGCAGCCCGACTGGCTGGTGTCCGACACCGACCCGCTG
ATGACGCAGGCGTGGGCGCTCATGCTGCTGGGGCGCCGCTTGCCCGAAATCGATGCGTGGACCGGGGTGGCCGACCTCTA
TCTCGTTCCCGCGATGGACCTGCCCTGGGAGGAGGACGGCACCCGCCTGTTCGGCAGCGATCTGGCGCGGCATCAGTTCA
TGGACGTCGCGATCGGCGAACTCGAACGGCGCCAGCTCCCATGGGCGTGGATCGAGGGCGAGGGCGACGCCCGGATCGAC
CATGCCGTCGCGGCGATTGCGGCGGCGGGGTTGATGTAG

Upstream 100 bases:

>100_bases
GGCTTTACGCGACCAGCGCGGTCTATGTCGTGCTGCTCGGCCTGTCGATCGACGGGCTGATCCAGTGGCGCCGCGCGGCG
GCGACCGGGCGGCTCGCGCC

Downstream 100 bases:

>100_bases
GGTATCGGCGGCGGTTTTGGGGTGGAGAGCTGCCATAAAGCCCTCTCCCCTTCAGGGGAGAGGGTTGGGAGAGGGGGACC
ATCCAAACCCCTCTCAACTG

Product: NAD metabolism ATPase/kinase-like protein

Products: NAD; pyrophosphate [C]

Alternate protein names: ATPase/Kinase Involved In NAD Metabolism-Like Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRAATAAALAQQPDWLVSDTDPL
MTQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDGTRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARID
HAVAAIAAAGLM

Sequences:

>Translated_172_residues
MTRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRAATAAALAQQPDWLVSDTDPL
MTQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDGTRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARID
HAVAAIAAAGLM
>Mature_171_residues
TRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRAATAAALAQQPDWLVSDTDPLM
TQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDGTRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARIDH
AVAAIAAAGLM

Specific function: NADr Is Bifunctional; It Interacts With Pnuc At Low Internal NAD Levels, Permitting Transport Of Nmn Intact Into The Cell. As NAD Levels Increase Within The Cell, The Affinity Of NADr For The Operator Regions Of NADa, NADb, And Pncb Increases, Repressing

COG id: COG3172

COG function: function code H; Predicted ATPase/kinase involved in NAD metabolism

Gene ontology:

Cell location: May Loosely Associate With The Membrane Through Its Interaction With The Membrane-Bound Pnuc [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18806; Mature: 18674

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRA
CCCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCEECCCCCCCCCCEEEEEEECCCHH
ATAAALAQQPDWLVSDTDPLMTQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDG
HHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCCCCCCCC
TRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARIDHAVAAIAAAGLM
CEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRHICLHGAESTGKSTLAPRLALRLGGLVVPEYGRTYAEANGTKFDEVDLLAIFDGHRA
CCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCEECCCCCCCCCCEEEEEEECCCHH
ATAAALAQQPDWLVSDTDPLMTQAWALMLLGRRLPEIDAWTGVADLYLVPAMDLPWEEDG
HHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCCCCCCCC
TRLFGSDLARHQFMDVAIGELERRQLPWAWIEGEGDARIDHAVAAIAAAGLM
CEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nicotinamide nucleotide; ATP [C]

Specific reaction: nicotinamide nucleotide + ATP = NAD + pyrophosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA