Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488408

Identifier: 103488408

GI number: 103488408

Start: 3075705

End: 3076955

Strand: Reverse

Name: 103488408

Synonym: Sala_2931

Alternate gene names: NA

Gene position: 3076955-3075705 (Counterclockwise)

Preceding gene: 103488409

Following gene: 103488407

Centisome position: 91.98

GC content: 73.54

Gene sequence:

>1251_bases
ATGATGAACGCCCCCGCCCTTCCCGCGGCGTCCGGCGCGATGCCCGCAGGCTTTGCCGCCTTCCTCGCCAATATCGGGCA
GGTTGCGCACGATGGCGACGCCGCCGGGTTCGGCCAGCTGCTTGCCGCAGCGCCGGTTCCGCTGCTCCCCACGGCAACGG
GCGCGCCCGCCGCAGCGGCCGCCCCGCCCGCAACGGTGATCAAGACCGACGCGGTGCCGGTTGCCGACACCGGCCCCGAC
GCCGCCGAGCTGCCCGTCGCACCGACGTCGGACACAGCCGCGGTTACGCTCGAAACATCGCCCGCCAAGTCCACCCCCGA
CGCAGGCGATGCAGCCGCGCTCGCCGCGACCCTGCTCGTCGCGCTCAGTGGCGCGCGTACCGGCCCCGCGCATGGCGCGA
ACAAGCCGACGGACACCGACACAGCGCCCGATGTCGAGCACCCCGGCGGGGCGCCCGCGGCACCTGCCATCGAAAACTGG
GCGACGATCGTTGCCGCGGTCCTTCCCGACACCGCGCGCGCCGGCGAACCCAAGCCCGCGAAGCCCGAAACCGCCAAGCC
GCACGCCGCCGCATCCGGTATCAACACGCCGGGCGCCGCTCCGGACAAAGCCGCTACCGATATGCGGGGACTGCTGCCCG
GCATCCTCGCTGCCGCATCGCCGCCGACCCGCGACACGGTCATGTCCGCCCTTCCGCTTGCCTCCGACCCGCCCGTCGCC
CGCGTGGCCGAGGCCGCCCCCGCGATGACGGTGTTGTTCACTCAGGCAGCAGCCCTCACCGCCGCCGCGCCGCTCGACGC
CGCCGCCCCCGCGACGATCGCCGAGCGCGTGCTCGACATGGAGAGCGACGGCGCGTGGATCGATCAGCTGGCGCGCGACA
TCGCCGCGACCAAATCGGACAGCGGCGACATCAGCTTTCGCCTGATGCCGCGCCACCTCGGCCGCCTCGACGTCGCGATG
CGGATGGAGGGCGAGGGCATGTCGCTGAAGATGGATACCCAGCACGAAGCGACCGCGACGATCGTCACCGCCGCGCAGGG
CCGCCTCGTCGACGAACTGCGCCAGCAGGGCGTGCGCGTCGTGGGCGCCGAAGTCACGCATACGCCGGGCGAGACCGGGC
GCCAGTCGCAGGGCCAGAACCAGGGCCGCGCCGCCACACCCGACACCGCCCACCTCATCGAAACCGCCACCGAGCGCGCC
GAGCAGCATGACGAGGAGCGCGCGGCGAACCGCCGCGGCCGCTTCGCCTGA

Upstream 100 bases:

>100_bases
GCAAGTCGGCCGAAGCCGAGCAGGAACGCCGCAACGACGCCAACCGCCCGCACCGCCCGCGTGTCGGCATGCGGCTGCGC
CTGATCGAAGGCGGCGCGGC

Downstream 100 bases:

>100_bases
CCAGAAAGGGTTCCGCCATGACCAAGGACAAGACCGAAACCGAGCCCAAGAAGAAGGGCAAGTTCAAGAAGCTGCTGCTG
GTTGGCGTGGCCGCGGTCGC

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MMNAPALPAASGAMPAGFAAFLANIGQVAHDGDAAGFGQLLAAAPVPLLPTATGAPAAAAAPPATVIKTDAVPVADTGPD
AAELPVAPTSDTAAVTLETSPAKSTPDAGDAAALAATLLVALSGARTGPAHGANKPTDTDTAPDVEHPGGAPAAPAIENW
ATIVAAVLPDTARAGEPKPAKPETAKPHAAASGINTPGAAPDKAATDMRGLLPGILAAASPPTRDTVMSALPLASDPPVA
RVAEAAPAMTVLFTQAAALTAAAPLDAAAPATIAERVLDMESDGAWIDQLARDIAATKSDSGDISFRLMPRHLGRLDVAM
RMEGEGMSLKMDTQHEATATIVTAAQGRLVDELRQQGVRVVGAEVTHTPGETGRQSQGQNQGRAATPDTAHLIETATERA
EQHDEERAANRRGRFA

Sequences:

>Translated_416_residues
MMNAPALPAASGAMPAGFAAFLANIGQVAHDGDAAGFGQLLAAAPVPLLPTATGAPAAAAAPPATVIKTDAVPVADTGPD
AAELPVAPTSDTAAVTLETSPAKSTPDAGDAAALAATLLVALSGARTGPAHGANKPTDTDTAPDVEHPGGAPAAPAIENW
ATIVAAVLPDTARAGEPKPAKPETAKPHAAASGINTPGAAPDKAATDMRGLLPGILAAASPPTRDTVMSALPLASDPPVA
RVAEAAPAMTVLFTQAAALTAAAPLDAAAPATIAERVLDMESDGAWIDQLARDIAATKSDSGDISFRLMPRHLGRLDVAM
RMEGEGMSLKMDTQHEATATIVTAAQGRLVDELRQQGVRVVGAEVTHTPGETGRQSQGQNQGRAATPDTAHLIETATERA
EQHDEERAANRRGRFA
>Mature_416_residues
MMNAPALPAASGAMPAGFAAFLANIGQVAHDGDAAGFGQLLAAAPVPLLPTATGAPAAAAAPPATVIKTDAVPVADTGPD
AAELPVAPTSDTAAVTLETSPAKSTPDAGDAAALAATLLVALSGARTGPAHGANKPTDTDTAPDVEHPGGAPAAPAIENW
ATIVAAVLPDTARAGEPKPAKPETAKPHAAASGINTPGAAPDKAATDMRGLLPGILAAASPPTRDTVMSALPLASDPPVA
RVAEAAPAMTVLFTQAAALTAAAPLDAAAPATIAERVLDMESDGAWIDQLARDIAATKSDSGDISFRLMPRHLGRLDVAM
RMEGEGMSLKMDTQHEATATIVTAAQGRLVDELRQQGVRVVGAEVTHTPGETGRQSQGQNQGRAATPDTAHLIETATERA
EQHDEERAANRRGRFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41713; Mature: 41713

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNAPALPAASGAMPAGFAAFLANIGQVAHDGDAAGFGQLLAAAPVPLLPTATGAPAAAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
APPATVIKTDAVPVADTGPDAAELPVAPTSDTAAVTLETSPAKSTPDAGDAAALAATLLV
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
ALSGARTGPAHGANKPTDTDTAPDVEHPGGAPAAPAIENWATIVAAVLPDTARAGEPKPA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCC
KPETAKPHAAASGINTPGAAPDKAATDMRGLLPGILAAASPPTRDTVMSALPLASDPPVA
CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHH
RVAEAAPAMTVLFTQAAALTAAAPLDAAAPATIAERVLDMESDGAWIDQLARDIAATKSD
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
SGDISFRLMPRHLGRLDVAMRMEGEGMSLKMDTQHEATATIVTAAQGRLVDELRQQGVRV
CCCEEEEECHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCEE
VGAEVTHTPGETGRQSQGQNQGRAATPDTAHLIETATERAEQHDEERAANRRGRFA
EECEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMNAPALPAASGAMPAGFAAFLANIGQVAHDGDAAGFGQLLAAAPVPLLPTATGAPAAAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
APPATVIKTDAVPVADTGPDAAELPVAPTSDTAAVTLETSPAKSTPDAGDAAALAATLLV
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
ALSGARTGPAHGANKPTDTDTAPDVEHPGGAPAAPAIENWATIVAAVLPDTARAGEPKPA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCC
KPETAKPHAAASGINTPGAAPDKAATDMRGLLPGILAAASPPTRDTVMSALPLASDPPVA
CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHH
RVAEAAPAMTVLFTQAAALTAAAPLDAAAPATIAERVLDMESDGAWIDQLARDIAATKSD
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
SGDISFRLMPRHLGRLDVAMRMEGEGMSLKMDTQHEATATIVTAAQGRLVDELRQQGVRV
CCCEEEEECHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCEE
VGAEVTHTPGETGRQSQGQNQGRAATPDTAHLIETATERAEQHDEERAANRRGRFA
EECEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA