Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488409

Identifier: 103488409

GI number: 103488409

Start: 3076952

End: 3077398

Strand: Reverse

Name: 103488409

Synonym: Sala_2932

Alternate gene names: NA

Gene position: 3077398-3076952 (Counterclockwise)

Preceding gene: 103488410

Following gene: 103488408

Centisome position: 92.0

GC content: 70.25

Gene sequence:

>447_bases
ATGACCGCCCGCCCCGCACGCCGCAAACGCATCATCCGCGTGCGCTCCGTCGAACATCAGCTCGCCGAGGCCAATCTGGC
CCGCGCCAATGGCGAACTTGCGAACCTCGTCGAGCTTGCGCGGCGGCTCGAAACGCTGCGCAGCGACCTCGCGATGGCGA
AGGGCGCGGTCGCGGGCCGCGCGCTCAACACCATCGGCGAACTCGCGATGCGGCTCGACCTCGCGCAGGAGAATCTGGCC
GCACCGCTTTGCAATGCGAGCGCGCGCCGCGACCAGATGGGGGCGCTGGCGCAGCGCGCGATGGCCAAGGAAGAATCGGC
CGTGCGCCTTTACGAAAAGAGCCGCAAGTCGGCCGAAGCCGAGCAGGAACGCCGCAACGACGCCAACCGCCCGCACCGCC
CGCGTGTCGGCATGCGGCTGCGCCTGATCGAAGGCGGCGCGGCATGA

Upstream 100 bases:

>100_bases
TCGCGCGCCGCGCCGACCAGCTCGCCTTTGTTTCGCAACCTGCCAGGGCGCAGGTCGATTTCGACACCTCCCGCCAAACG
CTGATCGAAGGATATTCCGC

Downstream 100 bases:

>100_bases
TGAACGCCCCCGCCCTTCCCGCGGCGTCCGGCGCGATGCCCGCAGGCTTTGCCGCCTTCCTCGCCAATATCGGGCAGGTT
GCGCACGATGGCGACGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTARPARRKRIIRVRSVEHQLAEANLARANGELANLVELARRLETLRSDLAMAKGAVAGRALNTIGELAMRLDLAQENLA
APLCNASARRDQMGALAQRAMAKEESAVRLYEKSRKSAEAEQERRNDANRPHRPRVGMRLRLIEGGAA

Sequences:

>Translated_148_residues
MTARPARRKRIIRVRSVEHQLAEANLARANGELANLVELARRLETLRSDLAMAKGAVAGRALNTIGELAMRLDLAQENLA
APLCNASARRDQMGALAQRAMAKEESAVRLYEKSRKSAEAEQERRNDANRPHRPRVGMRLRLIEGGAA
>Mature_147_residues
TARPARRKRIIRVRSVEHQLAEANLARANGELANLVELARRLETLRSDLAMAKGAVAGRALNTIGELAMRLDLAQENLAA
PLCNASARRDQMGALAQRAMAKEESAVRLYEKSRKSAEAEQERRNDANRPHRPRVGMRLRLIEGGAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16373; Mature: 16242

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARPARRKRIIRVRSVEHQLAEANLARANGELANLVELARRLETLRSDLAMAKGAVAGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALNTIGELAMRLDLAQENLAAPLCNASARRDQMGALAQRAMAKEESAVRLYEKSRKSAEA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQERRNDANRPHRPRVGMRLRLIEGGAA
HHHHHHCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
TARPARRKRIIRVRSVEHQLAEANLARANGELANLVELARRLETLRSDLAMAKGAVAGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALNTIGELAMRLDLAQENLAAPLCNASARRDQMGALAQRAMAKEESAVRLYEKSRKSAEA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQERRNDANRPHRPRVGMRLRLIEGGAA
HHHHHHCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA