Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487944

Identifier: 103487944

GI number: 103487944

Start: 2605806

End: 2606210

Strand: Reverse

Name: 103487944

Synonym: Sala_2465

Alternate gene names: NA

Gene position: 2606210-2605806 (Counterclockwise)

Preceding gene: 103487945

Following gene: 103487943

Centisome position: 77.91

GC content: 61.23

Gene sequence:

>405_bases
ATGATCACCATTGACGGCGGAAGCGGTCACTGGCTCGAGAGCCTGTTCCGCCTCGCCGTGGTTATCCTGGAACTGAGCGG
CACGGCAACCATCCTGACAGGTGCCGCGCTGGCGACCGCGACGTTTCTCCGTCAGGCCTGTCGAGGCCTCTATGCCGAAG
CCTATCGTCCGTTCCGATCGACACTCGGTCGCAGCATATTGCTCGGCCTTGAGTTTCTCGTAGCGGGCGACATCGTGAAA
TCACTGGTGATCAACCCTACGCTTAACGACCTCGTCGTGCTCGCGGGCCTCGTGTTTGTTCGTACCTTCCTGAGCATTTC
GCTGGGCGTCGAGATCAATGGTCATTGGCCTTGGGAGAATACGCGCATGGAGCGCGCCCGCCTCGACGCGGCGACGGACC
GGTGA

Upstream 100 bases:

>100_bases
ATGGTTTCGCAGCGCGCCGCAGGCGAGCGGGCGACCGTGGAACAATGCTATGCCTGTCACACGACCGACAGTTTCAACAA
TATTCGCAGGAGAGGCTGGT

Downstream 100 bases:

>100_bases
CCACCATGCCATCCGACACGCTCAGGCGCATCTTTCCGAGAGGATGGCGGCTTCGGCCGCATGGCTCGATTCAATGGGAG
AATTTTCATGCTTGAGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRSTLGRSILLGLEFLVAGDIVK
SLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWENTRMERARLDAATDR

Sequences:

>Translated_134_residues
MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRSTLGRSILLGLEFLVAGDIVK
SLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWENTRMERARLDAATDR
>Mature_134_residues
MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRSTLGRSILLGLEFLVAGDIVK
SLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWENTRMERARLDAATDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14615; Mature: 14615

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRS
CEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGRSILLGLEFLVAGDIVKSLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWEN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCC
TRMERARLDAATDR
CHHHHHHHHCCCCC
>Mature Secondary Structure
MITIDGGSGHWLESLFRLAVVILELSGTATILTGAALATATFLRQACRGLYAEAYRPFRS
CEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGRSILLGLEFLVAGDIVKSLVINPTLNDLVVLAGLVFVRTFLSISLGVEINGHWPWEN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCC
TRMERARLDAATDR
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA