Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487681

Identifier: 103487681

GI number: 103487681

Start: 2312125

End: 2312799

Strand: Direct

Name: 103487681

Synonym: Sala_2200

Alternate gene names: NA

Gene position: 2312125-2312799 (Clockwise)

Preceding gene: 103487679

Following gene: 103487682

Centisome position: 69.12

GC content: 69.63

Gene sequence:

>675_bases
ATGAAAGCGCATGCAACGGTCCCTTACAGCGCGCTGCCGACGATGACCGACGCCGCGCGGATCGCGGCGGCGGAGGCGTT
TCGCGACCATGTCGCCACGCGGCGAACGTGCCGGATGTTCAGCGACACACCGGTGCCGCGCGCGGTGATCGAGGCCGCGA
TCGCCGCGGCGGGGACCGCGCCCAGCGGCGCCAATCACCAGCCGTGGCACTTCGCCGTTGTCTCCTCGCCCGACATCAAG
CACCGCATCCGCCTCGCCGCCGAGGCCGAGGAGCGCGCATTTTACGCCAGCCGCGCCGGACAGGAATGGCTAGAGGCGCT
CGCGCCGCTCGGCACCGACGAGGACAAGGGCTTCCTCGACATCGCGCCCTGGCTGATCGTCGTTTTCGGACAACGGCGCG
GCGGGATCGAGCCCGGCGAATCGCGACAGAATTATTATGTCACCGAAAGCGTCGGCATCGCCTGCGGCCTGTTGCTCACC
GCGCTCCACGGCGCCGGGCTCGCGACCTTGACGCACACGCCGTCGCCGATGGGCTTCCTGCGCGACATCTGTGGCCGCCC
GGCCGATGAAAAGCCGCTGATGCTGGTCGTCGCGGGCCACCCGGCGCCCGACGCCACGGTGCCCGTTCACGCGACGCGCA
AAAAACCGCTGGACCGGATCAGCAGCTGGCTCTGA

Upstream 100 bases:

>100_bases
CGACGAATCCTTGCATCGTCCAGTTAGCATTACTGACATAAATGTCAATAGTTGGCAAACAACGCTGGCGCGATCATCCG
ATCGCCGATAGACCGGCGCC

Downstream 100 bases:

>100_bases
CGCTGCGCGGCACTTGGAGGAAAAGGCGATGAACCGGGGAACCACGACGCGCTACGAAAGCCTCGACGCGATCCGCGGGG
TCGCGGTGATGGGCATCCTT

Product: nitroreductase

Products: NA

Alternate protein names: Nitroreductase Family Protein; Oxidoreductase

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKAHATVPYSALPTMTDAARIAAAEAFRDHVATRRTCRMFSDTPVPRAVIEAAIAAAGTAPSGANHQPWHFAVVSSPDIK
HRIRLAAEAEERAFYASRAGQEWLEALAPLGTDEDKGFLDIAPWLIVVFGQRRGGIEPGESRQNYYVTESVGIACGLLLT
ALHGAGLATLTHTPSPMGFLRDICGRPADEKPLMLVVAGHPAPDATVPVHATRKKPLDRISSWL

Sequences:

>Translated_224_residues
MKAHATVPYSALPTMTDAARIAAAEAFRDHVATRRTCRMFSDTPVPRAVIEAAIAAAGTAPSGANHQPWHFAVVSSPDIK
HRIRLAAEAEERAFYASRAGQEWLEALAPLGTDEDKGFLDIAPWLIVVFGQRRGGIEPGESRQNYYVTESVGIACGLLLT
ALHGAGLATLTHTPSPMGFLRDICGRPADEKPLMLVVAGHPAPDATVPVHATRKKPLDRISSWL
>Mature_224_residues
MKAHATVPYSALPTMTDAARIAAAEAFRDHVATRRTCRMFSDTPVPRAVIEAAIAAAGTAPSGANHQPWHFAVVSSPDIK
HRIRLAAEAEERAFYASRAGQEWLEALAPLGTDEDKGFLDIAPWLIVVFGQRRGGIEPGESRQNYYVTESVGIACGLLLT
ALHGAGLATLTHTPSPMGFLRDICGRPADEKPLMLVVAGHPAPDATVPVHATRKKPLDRISSWL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42794271, Length=201, Percent_Identity=45.771144278607, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI257743489, Length=150, Percent_Identity=42.6666666666667, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI257743486, Length=169, Percent_Identity=39.6449704142012, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71980980, Length=217, Percent_Identity=34.1013824884793, Blast_Score=126, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281366032, Length=178, Percent_Identity=45.5056179775281, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24662475, Length=178, Percent_Identity=45.5056179775281, Blast_Score=138, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24061; Mature: 24061

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHATVPYSALPTMTDAARIAAAEAFRDHVATRRTCRMFSDTPVPRAVIEAAIAAAGTA
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
PSGANHQPWHFAVVSSPDIKHRIRLAAEAEERAFYASRAGQEWLEALAPLGTDEDKGFLD
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEH
IAPWLIVVFGQRRGGIEPGESRQNYYVTESVGIACGLLLTALHGAGLATLTHTPSPMGFL
HHHHHHHEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH
RDICGRPADEKPLMLVVAGHPAPDATVPVHATRKKPLDRISSWL
HHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCHHHHHHHCC
>Mature Secondary Structure
MKAHATVPYSALPTMTDAARIAAAEAFRDHVATRRTCRMFSDTPVPRAVIEAAIAAAGTA
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
PSGANHQPWHFAVVSSPDIKHRIRLAAEAEERAFYASRAGQEWLEALAPLGTDEDKGFLD
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEH
IAPWLIVVFGQRRGGIEPGESRQNYYVTESVGIACGLLLTALHGAGLATLTHTPSPMGFL
HHHHHHHEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH
RDICGRPADEKPLMLVVAGHPAPDATVPVHATRKKPLDRISSWL
HHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA