Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is katG

Identifier: 103487627

GI number: 103487627

Start: 2253691

End: 2255886

Strand: Reverse

Name: katG

Synonym: Sala_2146

Alternate gene names: 103487627

Gene position: 2255886-2253691 (Counterclockwise)

Preceding gene: 103487631

Following gene: 103487626

Centisome position: 67.44

GC content: 64.75

Gene sequence:

>2196_bases
ATGAACGACCAGACCCCCATCGGAAGCGGCTGCCCCGTCCACCAGCCCGGCGGCGTTCGCTCGCTGCTCGGCCGCACCAA
CAAGGACTGGTGGCCCGACATGCTGGCGACCGAGATACTGACTCCGAACGGGCCGTCGAACCCGATGGGTGAGGATTTCG
ATTATGCCAAGGCGTTCAAGTCGCTCGACTATTATGCGCTGAAGGACGATCTCAAGGCGCTGATGACCGACAGCCAGCCC
TGGTGGCCCGCCGATTATGGCCATTACGGGCCCTTTTTCATCCGAATGGCGTGGCACGCCGCGGGCACCTATCGCACCGC
CGACGGCCGCGGCGGCGCCAACAGCGGGCAACAGCGTTTCGCGCCGCTCGACAGCTGGCCCGACAACGGCAATCTCGACA
AGGCGCGCCGCCTGCTTTGGCCGATCAAGCAGAAATATGGCAACAAGATCAGCTGGGCCGACCTGTTCATCCTGGCTGGC
AATGTCGCGATCGAAAGCATGGGCGGTCCGGTGTTCGGCTTTGGCGGCGGGCGCGTCGATGTCTATGAACCCGAGCGCGA
CATCTATTGGGGCAGCGAAGACAAATGGGTCAATCAGGGCGTGCAGACGCGCATCGACCCGGCGAAGGGGATGGAGACGA
TCGAAGGTCCGCTCGCCGCGATCCAGATGGGCCTGATCTACGTCAATCCCGAGGGGCCGCAGGGCAACCCCCACGACGAT
GAGGGGATGGCGCGCGACATGAAGGAAACCTTCAAGCGCATGGCGATGAACGACGAGGAAACCGTTGCGCTCACCGCTGG
CGGCCATACTTTTGGCAAGGCGCACGGCAATGGCGACCCTTCGCTGCTCGGCCCCGCGCCCGCGGGCAGCGACCTTGCCG
CGCAGGGTTTCGGCTGGGTCAGCAGCCACGAGAGCGGCGGCATCGGCGAACATGCCGTCACCAGCGGCATCGAGGGCGCG
TGGACCAACACCCCGCGCGAGTGGACCGAGAATTATTTCCGCCTGCTGTTCGACTATGACTATGAACTTGTGAAGTCGCC
CGCCGGTGCCTGGCAGTGGCAGCCGATCAACCAGAAAGAGGAGGATATGGCCCCGGCGGCGTGGGATCCCGGCATCAAGG
TCCCGACGATGATGACCACCGCCGACATGGCGCTGAAGCGCGATCCCGCCTATCGCGCGATCAGCGAGCGGTTCCGCAAC
GACCATGAAGCCTTCAAGGACGCCTTCGCGCGCGCCTGGTTCAAGCTCACGCACCGCGACATGGGGCCGAAGGTCCGTTA
TCTCGGCCCCGAAGTCCCTGACGAGGATCTGATCTGGCAGGATCCGATCCCCGCGGGCACCAAGCCCTCGGACGCCGAAG
TTCAGGCGGTGAAGGACAAGATCGCCGCGAGCGGTCTGACCGTCAGCCAGCTCATCAAGACCGCCTGGGCGTCGGCCAGC
ACGTTCCGCAAGTCCGATTTCCGCGGCGGCGCCAATGGCGCGCGCGTGCGCCTCGCGCCGCAAAAGGACTGGGAGGTCAA
CGAACCCGCGATGCTCGCCAGGGTGCTGGACACGCTCGATGGCCTGCGCGGCAGCCTGTCGATGGCCGATGCGATCGTGC
TCGGCGGCGTGGTCGGGCTTGAAAAGGCGATCAGGGATGCGGGCTTCAACGTCGCCGTGCCGTTTACGGGCGGCCGCGGC
GATGCGACGCAGGAGCAGACCGACGTCGAAAGCTTTGAGGTGATGGAGCCCGAGGCCGACGCCTTCCGCAACTATGTGGG
CAAGAAGAAGCTCGCGGTGAAGGTGGAGGAAATGATGCTCGACAAGGCGTCGCTGCTCGGCCTGTCGGTGCCCGAAATGA
CCGTGCTGATCGGCGGGCTGCGGGTGCTCGGCGCCAATCATGGCGAGCGCGGCCACGGCCACTTCACCAGGCGGTCGGGT
CAGCTCACCAACGATTTCTTCGTCAACCTGCTCGACATGACCAATGTGTGGAAGGCGGTCGAGGGATCGAACGACCAGGA
ATATGTCGCCACCGACCGCACGACCGGCGGCGAGACCTGGCGCGCGACTCGGGCCGATCTGATCTTCGGTTCCAATTCGG
AACTGCGCGCGGTGGCCGAAGTCTATGCCGAGAACGGCCATGAAGAGAAGTTCGTGCGCGACTTCGTGAAGGCGTGGACC
AAGGTGATGAACGCCGACCGTTTCGACCTCGCCTGA

Upstream 100 bases:

>100_bases
CTATCCGCACTTTCCTGCCCCGGCAGCCATCTGGTTGCCTGCGTCATGCGCGCGTCGTCGCGTCCGACCATTATCATAAA
GCCTTGAGAGGAGAGACTGT

Downstream 100 bases:

>100_bases
TCGCCGCGCCCGGCCCCGCCGCCTGTCGGGGGGGGGGTCGGAGGCGGCCACAGGACGACGGGTCGCGACCCGCCCCCGGG
GACATGGGCCCGGGGGTGGG

Product: catalase/peroxidase HPI

Products: NA

Alternate protein names: CP; Peroxidase/catalase

Number of amino acids: Translated: 731; Mature: 731

Protein sequence:

>731_residues
MNDQTPIGSGCPVHQPGGVRSLLGRTNKDWWPDMLATEILTPNGPSNPMGEDFDYAKAFKSLDYYALKDDLKALMTDSQP
WWPADYGHYGPFFIRMAWHAAGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAG
NVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDD
EGMARDMKETFKRMAMNDEETVALTAGGHTFGKAHGNGDPSLLGPAPAGSDLAAQGFGWVSSHESGGIGEHAVTSGIEGA
WTNTPREWTENYFRLLFDYDYELVKSPAGAWQWQPINQKEEDMAPAAWDPGIKVPTMMTTADMALKRDPAYRAISERFRN
DHEAFKDAFARAWFKLTHRDMGPKVRYLGPEVPDEDLIWQDPIPAGTKPSDAEVQAVKDKIAASGLTVSQLIKTAWASAS
TFRKSDFRGGANGARVRLAPQKDWEVNEPAMLARVLDTLDGLRGSLSMADAIVLGGVVGLEKAIRDAGFNVAVPFTGGRG
DATQEQTDVESFEVMEPEADAFRNYVGKKKLAVKVEEMMLDKASLLGLSVPEMTVLIGGLRVLGANHGERGHGHFTRRSG
QLTNDFFVNLLDMTNVWKAVEGSNDQEYVATDRTTGGETWRATRADLIFGSNSELRAVAEVYAENGHEEKFVRDFVKAWT
KVMNADRFDLA

Sequences:

>Translated_731_residues
MNDQTPIGSGCPVHQPGGVRSLLGRTNKDWWPDMLATEILTPNGPSNPMGEDFDYAKAFKSLDYYALKDDLKALMTDSQP
WWPADYGHYGPFFIRMAWHAAGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAG
NVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDD
EGMARDMKETFKRMAMNDEETVALTAGGHTFGKAHGNGDPSLLGPAPAGSDLAAQGFGWVSSHESGGIGEHAVTSGIEGA
WTNTPREWTENYFRLLFDYDYELVKSPAGAWQWQPINQKEEDMAPAAWDPGIKVPTMMTTADMALKRDPAYRAISERFRN
DHEAFKDAFARAWFKLTHRDMGPKVRYLGPEVPDEDLIWQDPIPAGTKPSDAEVQAVKDKIAASGLTVSQLIKTAWASAS
TFRKSDFRGGANGARVRLAPQKDWEVNEPAMLARVLDTLDGLRGSLSMADAIVLGGVVGLEKAIRDAGFNVAVPFTGGRG
DATQEQTDVESFEVMEPEADAFRNYVGKKKLAVKVEEMMLDKASLLGLSVPEMTVLIGGLRVLGANHGERGHGHFTRRSG
QLTNDFFVNLLDMTNVWKAVEGSNDQEYVATDRTTGGETWRATRADLIFGSNSELRAVAEVYAENGHEEKFVRDFVKAWT
KVMNADRFDLA
>Mature_731_residues
MNDQTPIGSGCPVHQPGGVRSLLGRTNKDWWPDMLATEILTPNGPSNPMGEDFDYAKAFKSLDYYALKDDLKALMTDSQP
WWPADYGHYGPFFIRMAWHAAGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAG
NVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDD
EGMARDMKETFKRMAMNDEETVALTAGGHTFGKAHGNGDPSLLGPAPAGSDLAAQGFGWVSSHESGGIGEHAVTSGIEGA
WTNTPREWTENYFRLLFDYDYELVKSPAGAWQWQPINQKEEDMAPAAWDPGIKVPTMMTTADMALKRDPAYRAISERFRN
DHEAFKDAFARAWFKLTHRDMGPKVRYLGPEVPDEDLIWQDPIPAGTKPSDAEVQAVKDKIAASGLTVSQLIKTAWASAS
TFRKSDFRGGANGARVRLAPQKDWEVNEPAMLARVLDTLDGLRGSLSMADAIVLGGVVGLEKAIRDAGFNVAVPFTGGRG
DATQEQTDVESFEVMEPEADAFRNYVGKKKLAVKVEEMMLDKASLLGLSVPEMTVLIGGLRVLGANHGERGHGHFTRRSG
QLTNDFFVNLLDMTNVWKAVEGSNDQEYVATDRTTGGETWRATRADLIFGSNSELRAVAEVYAENGHEEKFVRDFVKAWT
KVMNADRFDLA

Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity

COG id: COG0376

COG function: function code P; Catalase (peroxidase I)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily

Homologues:

Organism=Escherichia coli, GI1790378, Length=726, Percent_Identity=55.9228650137741, Blast_Score=755, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6322919, Length=332, Percent_Identity=25.9036144578313, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KATG_SPHAL (Q1GR67)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_617188.1
- GeneID:   4080143
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_2146
- NMPDR:   fig|317655.9.peg.2072
- HOGENOM:   HBG285610
- OMA:   WPNALNL
- ProtClustDB:   PRK15061
- BioCyc:   SALA317655:SALA_2146-MONOMER
- HAMAP:   MF_01961
- InterPro:   IPR000763
- InterPro:   IPR010255
- InterPro:   IPR002016
- InterPro:   IPR019794
- PRINTS:   PR00460
- PRINTS:   PR00458
- TIGRFAMs:   TIGR00198

Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super

EC number: =1.11.1.6; =1.11.1.7

Molecular weight: Translated: 80471; Mature: 80471

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4

Important sites: ACT_SITE 99-99

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQTPIGSGCPVHQPGGVRSLLGRTNKDWWPDMLATEILTPNGPSNPMGEDFDYAKAFK
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
SLDYYALKDDLKALMTDSQPWWPADYGHYGPFFIRMAWHAAGTYRTADGRGGANSGQQRF
HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEHHHCCCEEECCCCCCCCCCHHHC
APLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCEEEECCCCCEEECCCCEEE
VYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDD
EECCCCCCEECCCCHHHHCCCHHCCCHHHCHHHHHHHHHEEEEEEEEECCCCCCCCCCCC
EGMARDMKETFKRMAMNDEETVALTAGGHTFGKAHGNGDPSLLGPAPAGSDLAAQGFGWV
HHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCC
SSHESGGIGEHAVTSGIEGAWTNTPREWTENYFRLLFDYDYELVKSPAGAWQWQPINQKE
CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCH
EDMAPAAWDPGIKVPTMMTTADMALKRDPAYRAISERFRNDHEAFKDAFARAWFKLTHRD
HHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
MGPKVRYLGPEVPDEDLIWQDPIPAGTKPSDAEVQAVKDKIAASGLTVSQLIKTAWASAS
CCCEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TFRKSDFRGGANGARVRLAPQKDWEVNEPAMLARVLDTLDGLRGSLSMADAIVLGGVVGL
HHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EKAIRDAGFNVAVPFTGGRGDATQEQTDVESFEVMEPEADAFRNYVGKKKLAVKVEEMML
HHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH
DKASLLGLSVPEMTVLIGGLRVLGANHGERGHGHFTRRSGQLTNDFFVNLLDMTNVWKAV
HHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EGSNDQEYVATDRTTGGETWRATRADLIFGSNSELRAVAEVYAENGHEEKFVRDFVKAWT
CCCCCCCEEEECCCCCCCCEEEECEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
KVMNADRFDLA
HHHCCCCCCCC
>Mature Secondary Structure
MNDQTPIGSGCPVHQPGGVRSLLGRTNKDWWPDMLATEILTPNGPSNPMGEDFDYAKAFK
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
SLDYYALKDDLKALMTDSQPWWPADYGHYGPFFIRMAWHAAGTYRTADGRGGANSGQQRF
HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEHHHCCCEEECCCCCCCCCCHHHC
APLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCEEEECCCCCEEECCCCEEE
VYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDD
EECCCCCCEECCCCHHHHCCCHHCCCHHHCHHHHHHHHHEEEEEEEEECCCCCCCCCCCC
EGMARDMKETFKRMAMNDEETVALTAGGHTFGKAHGNGDPSLLGPAPAGSDLAAQGFGWV
HHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCC
SSHESGGIGEHAVTSGIEGAWTNTPREWTENYFRLLFDYDYELVKSPAGAWQWQPINQKE
CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCH
EDMAPAAWDPGIKVPTMMTTADMALKRDPAYRAISERFRNDHEAFKDAFARAWFKLTHRD
HHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
MGPKVRYLGPEVPDEDLIWQDPIPAGTKPSDAEVQAVKDKIAASGLTVSQLIKTAWASAS
CCCEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TFRKSDFRGGANGARVRLAPQKDWEVNEPAMLARVLDTLDGLRGSLSMADAIVLGGVVGL
HHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EKAIRDAGFNVAVPFTGGRGDATQEQTDVESFEVMEPEADAFRNYVGKKKLAVKVEEMML
HHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH
DKASLLGLSVPEMTVLIGGLRVLGANHGERGHGHFTRRSGQLTNDFFVNLLDMTNVWKAV
HHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EGSNDQEYVATDRTTGGETWRATRADLIFGSNSELRAVAEVYAENGHEEKFVRDFVKAWT
CCCCCCCEEEECCCCCCCCEEEECEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
KVMNADRFDLA
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA