| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ubiG [H]
Identifier: 103487624
GI number: 103487624
Start: 2250165
End: 2250983
Strand: Reverse
Name: ubiG [H]
Synonym: Sala_2143
Alternate gene names: 103487624
Gene position: 2250983-2250165 (Counterclockwise)
Preceding gene: 103487626
Following gene: 103487616
Centisome position: 67.29
GC content: 67.64
Gene sequence:
>819_bases ATGACTGCCGCCACGATCAACCCGCACGAAGCCGCCCATTTCGGTGCGCTCGCCGCCGACTGGTGGGATCCGCGCGGATC GTCGGCGATGCTGCACAGGCTGAACCCGGTGCGGCTGGCCTATATCCGCGAGCAGATCGATGGCCATTGGCACGTCGATG CGCGTGAGCGCCATCCGCTCGCGGGCAAGCACGTGCTCGATGTCGGCTGCGGCGCCGGGCTGCTGTGCGAGCCGCTCGCG CGGATGGGCGCGAAGGTCATCGGCATCGATGCCGCGCCGGAAAATATCGCGGCGGCAAAGGATCATGCGGCGGGGCAGGG GCTGGCGATCAGCTATTTCGCCGGTGAGCTGGCTGACCTCCCGAATCCGTTCGTGTCGAGCGAAGTCGAGACACTCTTGG GGAGCGCCGACCTTCGGGGTGTCTCGACTTCGCTCGACACGAACGGGGAGGGGAAGGGTCAGTTCGACCTCGTCACCTCG ATGGAGGTGATCGAGCATGTCGTCGATCCTGCCGTCTTCGTCGCCGAACTCGCGGCGCGCCTCGCGCCCGGCGGGCTGAT GATCCTGTCGACGCCGAACCGCACGATCGCCTCGAAACTGCTGCTCGTCGAGGCCGCCGAACGGATCGGCGCGGTGCCGC GCGGGACGCACGACTGGGACCGGTTTCTAAAGCCGGAGGAGCTGACGAAACTGCTCGAAGGCGCGGGGCTGGAGGTTATC GACCGCACCGGCCTGGCGCCGTCACCGGCGCGGGGCTTCAAGCTCGGCGGCAGCGAGGCGCTCAACTATCTGATGACCGC GCGCTGGCCGGATAGATAG
Upstream 100 bases:
>100_bases CGCGTCGTTACGGAAGGGGAAGGGCGATGGCAAGCGCGAGAAACTGTGCGCCGGATAGAATTTCTTGCACCGGCGATGCC GCGGTGCCACATCACAGCCC
Downstream 100 bases:
>100_bases GACGCGCGCCCGAGGATGGTCATTGCGAGCGCAGCGAAGCAATCTCCCGCGCAAGGATCAAGGGCTGGATTTTGCCGCGT TGCCTTCGGGCCCCCGCAAT
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPLAGKHVLDVGCGAGLLCEPLA RMGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADLPNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTS MEVIEHVVDPAVFVAELAARLAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVI DRTGLAPSPARGFKLGGSEALNYLMTARWPDR
Sequences:
>Translated_272_residues MTAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPLAGKHVLDVGCGAGLLCEPLA RMGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADLPNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTS MEVIEHVVDPAVFVAELAARLAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVI DRTGLAPSPARGFKLGGSEALNYLMTARWPDR >Mature_271_residues TAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPLAGKHVLDVGCGAGLLCEPLAR MGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADLPNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTSM EVIEHVVDPAVFVAELAARLAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVID RTGLAPSPARGFKLGGSEALNYLMTARWPDR
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=268, Percent_Identity=34.7014925373134, Blast_Score=149, Evalue=2e-36, Organism=Escherichia coli, GI1788564, Length=266, Percent_Identity=37.218045112782, Blast_Score=149, Evalue=3e-37, Organism=Caenorhabditis elegans, GI115533050, Length=245, Percent_Identity=33.8775510204082, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI281365311, Length=235, Percent_Identity=31.4893617021277, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI24585589, Length=228, Percent_Identity=32.4561403508772, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 28981; Mature: 28850
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPL CCCCCCCCHHHHHHCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCC AGKHVLDVGCGAGLLCEPLARMGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADL CCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCEEEEHHHHHHHHC PNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTSMEVIEHVVDPAVFVAELAAR CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH LAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVI HCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCEEE DRTGLAPSPARGFKLGGSEALNYLMTARWPDR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure TAATINPHEAAHFGALAADWWDPRGSSAMLHRLNPVRLAYIREQIDGHWHVDARERHPL CCCCCCCHHHHHHCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCC AGKHVLDVGCGAGLLCEPLARMGAKVIGIDAAPENIAAAKDHAAGQGLAISYFAGELADL CCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCEEEEHHHHHHHHC PNPFVSSEVETLLGSADLRGVSTSLDTNGEGKGQFDLVTSMEVIEHVVDPAVFVAELAAR CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH LAPGGLMILSTPNRTIASKLLLVEAAERIGAVPRGTHDWDRFLKPEELTKLLEGAGLEVI HCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCEEE DRTGLAPSPARGFKLGGSEALNYLMTARWPDR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]