| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is thiL [H]
Identifier: 103487507
GI number: 103487507
Start: 2136430
End: 2137383
Strand: Reverse
Name: thiL [H]
Synonym: Sala_2024
Alternate gene names: 103487507
Gene position: 2137383-2136430 (Counterclockwise)
Preceding gene: 103487508
Following gene: 103487506
Centisome position: 63.89
GC content: 70.02
Gene sequence:
>954_bases ATGGCTATCCCCTACGCTTCCGCGATGACCGAAGCCGATTTCATCGCCCGCCTGCGCGCCATCGCGACCGATCCCGCCGC GCGCGGGCTCGCCGACGATGCTGCGGTGTGGGAAGGGCTGGTGCTCACCCACGACATGATCGTCGAGGGCGTTCATTTCC TGCCCGACGACCGGCCGCAGGATGTTGCGTGGAAACTTGTTGCGGTGAACCTGTCCGACCTGGCGGCGAAGGGGGCGGCG CCGGTCGGCGTGCTCGTCGGGTACAGCCTTGGCGACGCGGCGTGGGACGCGGGCTTTGTCGAGGGGCTCGATGGAGCGCT GCGCCGCTTCGGGGTCGCCCTGCTCGGCGGCGACACGGTGCGCGCGCCCACGGGAACACCGCGCAGCTTCGGCCTCACCG CCATCGGTCGGGCGCCCGAAGGCGGCGCGCCGACGCGCGGCGGCGCGCGGCCGGGCGACCAGATCTGGGTGACGGGGACG ATCGGCAATGCCGGTCTGGGCCTCGCGATGCGGCTGGGGCAGGTCGAGCCGAACGAGACCTGCCTTGCCGCCTATTGCCG GCCGCAGCCGCAGCTGACCTTTGGGCAGGCAGTGGCGCCGCATGTTCATGCGATGATGGACCTATCCGACGGACTGTTGA TCGACGCACAGCGCATGGCGGCGGCGAGCGGGTGCGAACTGGGCATCATGATGGATGCGATCCCCCTGTCGGCGGCGCTG CTGGCGGTGCGGCCCGATGTGCTCGACACGCGGCTCGCCGCAGCGACCGCGGGTGACGATTATCAGCTCTTGTTCGCGGC CGTCCCCGCCGCGGCCGATGCGATCCGCGAAATTGCGGCCGGGCTGAATGTTGCCGTGACCGCAATCGGCCATGCGGGGG TGGGCGAGGGGATCGTGCTGACACACCATGCAAAGCGTGTTGCGGTGCCCGATCGACCCGGATTCATGCACTGA
Upstream 100 bases:
>100_bases GAGGGGCGGCAACGTCGGCGCCAAAGCCCCTCCGTCAGCGCTTCGCGCTGCCACCTCCCCATCGCTGCGCGACAGGGAGG ATCGGTATCTTTTATATGGT
Downstream 100 bases:
>100_bases CGACCGGAGCCCGTCCGAATCGTCATCCCGCCTTTCGCCGCGATGACGTTCTGAGGCGAGGTTACGCAAATGGGCCGAAT AACCGGGCTTGCCCTTGGCT
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MAIPYASAMTEADFIARLRAIATDPAARGLADDAAVWEGLVLTHDMIVEGVHFLPDDRPQDVAWKLVAVNLSDLAAKGAA PVGVLVGYSLGDAAWDAGFVEGLDGALRRFGVALLGGDTVRAPTGTPRSFGLTAIGRAPEGGAPTRGGARPGDQIWVTGT IGNAGLGLAMRLGQVEPNETCLAAYCRPQPQLTFGQAVAPHVHAMMDLSDGLLIDAQRMAAASGCELGIMMDAIPLSAAL LAVRPDVLDTRLAAATAGDDYQLLFAAVPAAADAIREIAAGLNVAVTAIGHAGVGEGIVLTHHAKRVAVPDRPGFMH
Sequences:
>Translated_317_residues MAIPYASAMTEADFIARLRAIATDPAARGLADDAAVWEGLVLTHDMIVEGVHFLPDDRPQDVAWKLVAVNLSDLAAKGAA PVGVLVGYSLGDAAWDAGFVEGLDGALRRFGVALLGGDTVRAPTGTPRSFGLTAIGRAPEGGAPTRGGARPGDQIWVTGT IGNAGLGLAMRLGQVEPNETCLAAYCRPQPQLTFGQAVAPHVHAMMDLSDGLLIDAQRMAAASGCELGIMMDAIPLSAAL LAVRPDVLDTRLAAATAGDDYQLLFAAVPAAADAIREIAAGLNVAVTAIGHAGVGEGIVLTHHAKRVAVPDRPGFMH >Mature_316_residues AIPYASAMTEADFIARLRAIATDPAARGLADDAAVWEGLVLTHDMIVEGVHFLPDDRPQDVAWKLVAVNLSDLAAKGAAP VGVLVGYSLGDAAWDAGFVEGLDGALRRFGVALLGGDTVRAPTGTPRSFGLTAIGRAPEGGAPTRGGARPGDQIWVTGTI GNAGLGLAMRLGQVEPNETCLAAYCRPQPQLTFGQAVAPHVHAMMDLSDGLLIDAQRMAAASGCELGIMMDAIPLSAALL AVRPDVLDTRLAAATAGDDYQLLFAAVPAAADAIREIAAGLNVAVTAIGHAGVGEGIVLTHHAKRVAVPDRPGFMH
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=321, Percent_Identity=35.202492211838, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 32543; Mature: 32411
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPYASAMTEADFIARLRAIATDPAARGLADDAAVWEGLVLTHDMIVEGVHFLPDDRPQ CCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC DVAWKLVAVNLSDLAAKGAAPVGVLVGYSLGDAAWDAGFVEGLDGALRRFGVALLGGDTV CEEEEEEEEEHHHHHHCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHCEEEECCCEE RAPTGTPRSFGLTAIGRAPEGGAPTRGGARPGDQIWVTGTIGNAGLGLAMRLGQVEPNET ECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHEECCCCCCCC CLAAYCRPQPQLTFGQAVAPHVHAMMDLSDGLLIDAQRMAAASGCELGIMMDAIPLSAAL EEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCEEEEEEHHHHHHHH LAVRPDVLDTRLAAATAGDDYQLLFAAVPAAADAIREIAAGLNVAVTAIGHAGVGEGIVL HHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEE THHAKRVAVPDRPGFMH EECCCEEECCCCCCCCC >Mature Secondary Structure AIPYASAMTEADFIARLRAIATDPAARGLADDAAVWEGLVLTHDMIVEGVHFLPDDRPQ CCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC DVAWKLVAVNLSDLAAKGAAPVGVLVGYSLGDAAWDAGFVEGLDGALRRFGVALLGGDTV CEEEEEEEEEHHHHHHCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHCEEEECCCEE RAPTGTPRSFGLTAIGRAPEGGAPTRGGARPGDQIWVTGTIGNAGLGLAMRLGQVEPNET ECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHEECCCCCCCC CLAAYCRPQPQLTFGQAVAPHVHAMMDLSDGLLIDAQRMAAASGCELGIMMDAIPLSAAL EEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCEEEEEEHHHHHHHH LAVRPDVLDTRLAAATAGDDYQLLFAAVPAAADAIREIAAGLNVAVTAIGHAGVGEGIVL HHCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEE THHAKRVAVPDRPGFMH EECCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]