| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ppk [H]
Identifier: 103487239
GI number: 103487239
Start: 1847844
End: 1850012
Strand: Reverse
Name: ppk [H]
Synonym: Sala_1754
Alternate gene names: 103487239
Gene position: 1850012-1847844 (Counterclockwise)
Preceding gene: 103487240
Following gene: 103487238
Centisome position: 55.3
GC content: 63.49
Gene sequence:
>2169_bases ATGTCGATAACCGGTGGCCCCTTGCGGGCCGAAAATGACCAGGAAACCGGATTTCCGTCGTTCGGCCCCGAACGCTTTTT CAATCGCGAACTGTCATGGCTCGCTTTCAACCGCCGGGTGATGGAGGAGGCGCGCAATCCCGCGCATCCGCTCCTCGAAC GTCTGCGTTTCCTGTCGATTTCGGGAAGCAATCTCGACGAGTTCTTCATGGTCCGCGTCGCCGGGCTGAAGGGGCAGCAG CTTCAGGGGATCGACGATCCCTCGGCCGACGGCCGCTCGCCGGGCCAGCAGCTTGCCGAGATCGAGGCCGAGGTGAACCG CCTCGTCGACCAGCAGCAAAGCGAGTGGCAGCGGCTGCACCGCCAGCTCGCCGAACAGGGCATCGTCGTCCACGGCGCCG GATCGGACAAGGAAGCGCTGCGCACCAGTCTGCGCCAGTATTTCATCGACCAGATTTTCCCCATATTGACGCCGCAGGTA CTCGATCCCGCGCATCCCTTTCCCTTCATTCCCAACCGCGGCCTCGGCGTGATTTTCGACCTTCAGCGGCGGGCCAGCGG CGACACCGTGCTCGAACTGGTGATGATCCCGGCCTCGCTGCCGCGTTTCGTTCCGGTGCCGGGTGAGGCGAGCGGTTTTG TTCCGGTCGAATATCTGATCGAATTGTTCGGCGACCTGCTGTTCCCCGGCTTCACCATCCGCTCGCTGGGCGTCTTTCGC ATCATCCGCGACAGCGACATCGAGCTGGAGGAAGAGGCCGAGGATCTCGTCCGCCTGTTCCGCACCGCAATCCGTCGCCG CCGCCGCGGCCGCGTGATCCTGATGGAGCTGGAGGCCGACATGCCAGCAGAAATCGCCGCGGTGCTGGGCGCCGACATTC AGGGGCACGAGGCGATCGTGGCCAAGATCGGCGGCTTCATCGGCCTCGCCGCGCTTTCGGCGCTCGTCGACGTCGATCGT CCCGACCTCAAGTTTCCGGCCTATTCGCCGCGCTTTCCCGAACGCATCCGCGAACATGGCGGCGACTGTTTCGCGGCGAT CCGGTCGAAGGACATCGTCGTCCATCATCCTTATGAAAGTTTCGACGTCGTCCTGTCCTTTCTGCGGCAGGCGGCGGCCG ATCCCGATGTCGTCGCGATCAAGCAGACGCTCTATCGCGCGGGCAACCAGTCGCCGGTCATCCGCGCGCTGATCGAGGCG GCCGAGGCGGGCAAGTCGGTCACGGCGGTGGTCGAACTCAAGGCGCGTTTCGACGAGGAACAGAATCTGCTCTGGGCGAA CCAGCTCGAACGCGCGGGGGTGCAGGTCGTCTACGGCTTCATCGAGTGGAAAACGCATGCCAAGATTTCGATGGTCGTGC GGCGCGAGGGGCAGGGCTATCGCACCTATTGTCACTTCGGCACCGGCAATTATCATCCGGTGACCGCGCGCATCTATACC GACCTCAGCTTCTTTACCGCCGATCCGCGCGCGGGGCGCGACGCGGCGCAACTCTTCAACTACATCACCGGCTATGTCGA ACCCGAACGGCTCGAGCTTATCACCATGTCGCCGCTGAACATGCGCCAGCATCTTTGCGAACTGATCGACGCCGAAATCG TGGCGGCCCGGTCGGGGCGCCCTTCGGGCGTATGGGCCAAGATGAACAGCATTGTCGACCCCGACATCATCGACAAGCTT TACGAGGCGAGCGCGGCGGGTGTGCCGATCGAGCTGATCGTGCGCGGCATCTGTTGCCTGCGCCCAGGCGTCCCCGGCCT GTCCGACACGATCCGCGTCAAGTCGGTCGTCGGTCGCTTCCTCGAACATAGCCGCGTCTGGGCCTTTGCCAATGGCGCCG CGCTGCCGCATCGCGCGGCGCGGCTTTACATCTCCAGCGCCGACTGGATGCCGCGCAATTTCGACCGCCGCGTCGAATAT ATGATCCCGATCGAAAATCCGACCGTTCACGACCAGATCCTCGACCAGGTGCTCGTCGCCAATCTGATCGACAATGAACA AAGCTGGATATTGCAGGCGGATGGCACGTCGGTGCGCGTGGCGCCCGGCGACAAGCCCTTTAACCTGCACCATTATTTCA TGAACAACCCGTCGCTGTCGGGTCGCGGCACCGCGCTTCACCAGCGTCAGGACGTGCCGACGCTCGCCTACGACCTTCGC GAAGATTGA
Upstream 100 bases:
>100_bases TCGAACAGGGGCGCCGCCTTGGCGTCCGTCTCGCGCGTGAAACATTGCTGTCACAAGGGCTGATCGACCCCGATCTCCTC GAAAGGCAGGATGAAGACCA
Downstream 100 bases:
>100_bases GACGAAACGGCTTGGCCCTGCTGCGCACCTCGAAACCGGCGGTTCATCGCTCGGCGGTCATCGACATCGGCTCCAACTCG GTCCGCCTCGTCGTTTATGA
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 722; Mature: 721
Protein sequence:
>722_residues MSITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSISGSNLDEFFMVRVAGLKGQQ LQGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLHRQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQV LDPAHPFPFIPNRGLGVIFDLQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFR IIRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIVAKIGGFIGLAALSALVDVDR PDLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYESFDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEA AEAGKSVTAVVELKARFDEEQNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYT DLSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGRPSGVWAKMNSIVDPDIIDKL YEASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRFLEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEY MIPIENPTVHDQILDQVLVANLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLR ED
Sequences:
>Translated_722_residues MSITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSISGSNLDEFFMVRVAGLKGQQ LQGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLHRQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQV LDPAHPFPFIPNRGLGVIFDLQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFR IIRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIVAKIGGFIGLAALSALVDVDR PDLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYESFDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEA AEAGKSVTAVVELKARFDEEQNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYT DLSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGRPSGVWAKMNSIVDPDIIDKL YEASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRFLEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEY MIPIENPTVHDQILDQVLVANLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLR ED >Mature_721_residues SITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSISGSNLDEFFMVRVAGLKGQQL QGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLHRQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQVL DPAHPFPFIPNRGLGVIFDLQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFRI IRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIVAKIGGFIGLAALSALVDVDRP DLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYESFDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEAA EAGKSVTAVVELKARFDEEQNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYTD LSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGRPSGVWAKMNSIVDPDIIDKLY EASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRFLEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEYM IPIENPTVHDQILDQVLVANLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLRE D
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=654, Percent_Identity=34.8623853211009, Blast_Score=375, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 80879; Mature: 80748
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSI CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC SGSNLDEFFMVRVAGLKGQQLQGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLH CCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQVLDPAHPFPFIPNRGLGVIFD HHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEEE LQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFR ECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCEEE IIRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIV EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHH AKIGGFIGLAALSALVDVDRPDLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYES HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHCCCCEEEECCCHH FDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEAAEAGKSVTAVVELKARFDEE HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCC QNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYT CCCHHHHHHHHCCCEEEEEEHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEE DLSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGR CCCEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEECCCC PSGVWAKMNSIVDPDIIDKLYEASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRF CCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEYMIPIENPTVHDQILDQVLVA HHHCCEEEEECCCCCCCHHHEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH NLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLR HHHCCCCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHCC ED CC >Mature Secondary Structure SITGGPLRAENDQETGFPSFGPERFFNRELSWLAFNRRVMEEARNPAHPLLERLRFLSI CCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC SGSNLDEFFMVRVAGLKGQQLQGIDDPSADGRSPGQQLAEIEAEVNRLVDQQQSEWQRLH CCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQLAEQGIVVHGAGSDKEALRTSLRQYFIDQIFPILTPQVLDPAHPFPFIPNRGLGVIFD HHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEEE LQRRASGDTVLELVMIPASLPRFVPVPGEASGFVPVEYLIELFGDLLFPGFTIRSLGVFR ECCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCEEE IIRDSDIELEEEAEDLVRLFRTAIRRRRRGRVILMELEADMPAEIAAVLGADIQGHEAIV EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHH AKIGGFIGLAALSALVDVDRPDLKFPAYSPRFPERIREHGGDCFAAIRSKDIVVHHPYES HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHCCCCEEEECCCHH FDVVLSFLRQAAADPDVVAIKQTLYRAGNQSPVIRALIEAAEAGKSVTAVVELKARFDEE HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCC QNLLWANQLERAGVQVVYGFIEWKTHAKISMVVRREGQGYRTYCHFGTGNYHPVTARIYT CCCHHHHHHHHCCCEEEEEEHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEE DLSFFTADPRAGRDAAQLFNYITGYVEPERLELITMSPLNMRQHLCELIDAEIVAARSGR CCCEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEECCCC PSGVWAKMNSIVDPDIIDKLYEASAAGVPIELIVRGICCLRPGVPGLSDTIRVKSVVGRF CCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LEHSRVWAFANGAALPHRAARLYISSADWMPRNFDRRVEYMIPIENPTVHDQILDQVLVA HHHCCEEEEECCCCCCCHHHEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH NLIDNEQSWILQADGTSVRVAPGDKPFNLHHYFMNNPSLSGRGTALHQRQDVPTLAYDLR HHHCCCCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHCC ED CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA