Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is bglA [H]

Identifier: 103486508

GI number: 103486508

Start: 1052515

End: 1053861

Strand: Reverse

Name: bglA [H]

Synonym: Sala_1019

Alternate gene names: 103486508

Gene position: 1053861-1052515 (Counterclockwise)

Preceding gene: 103486509

Following gene: 103486507

Centisome position: 31.5

GC content: 64.96

Gene sequence:

>1347_bases
ATGACGCAGACCATCTTTCCCGACGATTTCCTGTGGGGCGCGGCCACCGCCGCCTATCAGATCGAGGGATCGCCGCTTGC
CGATGGAGCGGGGCCGAGCATCTGGCAGCGTTTCAGCCACGATCCGCGGCTGATGGCGGCGAAAGGCGACACCGGCGACA
TCGCGTGCGACCATTATAACCGGATGCCCGCCGACGTTGCCCTGATGAAGGAACTGGGACTTCAGGCCTATCGCTTCAGC
GTCAACTGGGGCCGCATATTGCCCGAAGGCACCGGGCGCGTGAACGAGCCGGGGCTCGATTTCTATGAACGGCTGGTCGA
TGAACTGCTCAGGCATGGCATCGAACCGTTGCTGACGCTCCACCATTGGGATCTGCCCGCCGCGCTCGACGACCGCGGCG
GCTGGCTCAACCGCGACAGCGCCGGCTGGTTCGCCGACTATGCCGCGATCATGTATCGCCGCCTCGACGGGCGGGTGAAG
AAATGGGTGACACTCAACGAGCCGTGGGTGATCACCGACGGCGGCTACCTCCACGGCGCCCTCGCCCCCGGCCACCGCAA
CATGTTCGAGGCGCCGATCGCCAGCCACAATCTGATGCGCGCGCACGGCGCGGCGGTGCAGGCCTATCGCAGCGAAGGGG
CGCACGAAATCGGCCTCGTCGTCAATATCGAACCCAAATATCCGGCGAGCGACGGCATCGAGGACGTGGCGGCGGCGGCG
CGCGCGCACGCCTATATGAACCGCCAGTATCTCGATCCTGCGCTGAAGGGCAGCTACCCCGCCGAACTCGCCGAAATCTT
CGGCGAAGCCTGGCCCCAATGGCCCGCCGAAGACATGCGGTCCATCTGCCAGCCGGTCGATTTCATCGGCATCAATTACT
ACACGCGCAACGTCGTGCAGGCCGACCCGAACCAGTGGCCGCTGCGCGCCTCGCCGGTCCGGCAGAACGCCACGCACACG
ACGACCGACTGGGAAGTCTGTCCGCCCGCGCTCACCGACATGCTCATCTGGTTCCGTGATACATACGGCAACATTCCCGT
CTATATCACCGAAAATGGCGCGGCCTTTTACGACCCGCCGACCGCGGGGCCCGCCGGCATCGACGATCCGCTGCGCTGCG
ACTATCTCCGCACGCACATCTCGGCGATCGGCGACGCGATCCGCCAGGGCGTCGACGTGCGCGGCTATATGGCCTGGTCG
CTGCTCGACAATCTCGAATGGTCGCTCGGCTATTCGAAGCGCTTCGGCATCGTCCACGTCGATTATGAAACGCAGGTGCG
CACGCCGAAACGCAGCGCGCGCTTCTATTCGAGTGTCATCCGGTCAAACGGCGGGAACCTCGGCTGA

Upstream 100 bases:

>100_bases
GCCACAATGCCTGGGATCCCGCCTATGACGATCCGGCGCTCTATGCCTGGCTGCTCGAACAGGCGCTCCCCTCCCCGACG
AGCACCGACAAGGACAAGAA

Downstream 100 bases:

>100_bases
TGCGCTGGCTGGTGCCGTTGCTCGCCCTCGCGCTCGCGCTCCCCGCCGCGGCGAAGGAACGCGCCGACCGGTTCAGCGCG
ATGACCTATAACATCCGCCT

Product: Beta-glucosidase

Products: NA

Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MTQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYNRMPADVALMKELGLQAYRFS
VNWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTLHHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVK
KWVTLNEPWVITDGGYLHGALAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAA
RAHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQADPNQWPLRASPVRQNATHT
TTDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPPTAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWS
LLDNLEWSLGYSKRFGIVHVDYETQVRTPKRSARFYSSVIRSNGGNLG

Sequences:

>Translated_448_residues
MTQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYNRMPADVALMKELGLQAYRFS
VNWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTLHHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVK
KWVTLNEPWVITDGGYLHGALAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAA
RAHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQADPNQWPLRASPVRQNATHT
TTDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPPTAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWS
LLDNLEWSLGYSKRFGIVHVDYETQVRTPKRSARFYSSVIRSNGGNLG
>Mature_447_residues
TQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYNRMPADVALMKELGLQAYRFSV
NWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTLHHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVKK
WVTLNEPWVITDGGYLHGALAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAAR
AHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQADPNQWPLRASPVRQNATHTT
TDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPPTAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWSL
LDNLEWSLGYSKRFGIVHVDYETQVRTPKRSARFYSSVIRSNGGNLG

Specific function: Can Hydrolyze Salicin, Cellobiose, And Probably Arbutin. [C]

COG id: COG2723

COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 1 family [H]

Homologues:

Organism=Homo sapiens, GI32481206, Length=472, Percent_Identity=38.771186440678, Blast_Score=299, Evalue=3e-81,
Organism=Homo sapiens, GI13273313, Length=469, Percent_Identity=36.2473347547974, Blast_Score=281, Evalue=7e-76,
Organism=Homo sapiens, GI110681710, Length=475, Percent_Identity=32.6315789473684, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI24497614, Length=479, Percent_Identity=33.6116910229645, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI28376633, Length=458, Percent_Identity=31.2227074235808, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI190360571, Length=97, Percent_Identity=46.3917525773196, Blast_Score=95, Evalue=2e-19,
Organism=Escherichia coli, GI1789070, Length=476, Percent_Identity=31.5126050420168, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI2367174, Length=485, Percent_Identity=30.5154639175258, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI2367270, Length=469, Percent_Identity=31.7697228144989, Blast_Score=194, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI17539390, Length=474, Percent_Identity=33.3333333333333, Blast_Score=243, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17552856, Length=468, Percent_Identity=33.3333333333333, Blast_Score=241, Evalue=5e-64,
Organism=Drosophila melanogaster, GI21356577, Length=476, Percent_Identity=33.4033613445378, Blast_Score=265, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001360
- InterPro:   IPR018120
- InterPro:   IPR017736
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00232 Glyco_hydro_1 [H]

EC number: =3.2.1.21 [H]

Molecular weight: Translated: 50081; Mature: 49950

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYN
CCCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCC
RMPADVALMKELGLQAYRFSVNWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTL
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEE
HHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVKKWVTLNEPWVITDGGYLHGA
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEECCCEEEECCCEEEEE
LAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAA
ECCCCCCHHCCCCHHCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHH
RAHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQ
HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEECCCEECCEEE
ADPNQWPLRASPVRQNATHTTTDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCC
TAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWSLLDNLEWSLGYSKRFGIVHV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCEEEE
DYETQVRTPKRSARFYSSVIRSNGGNLG
CCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYN
CCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCC
RMPADVALMKELGLQAYRFSVNWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTL
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEE
HHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVKKWVTLNEPWVITDGGYLHGA
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEECCCEEEECCCEEEEE
LAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAA
ECCCCCCHHCCCCHHCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHH
RAHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQ
HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEECCCEECCEEE
ADPNQWPLRASPVRQNATHTTTDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCC
TAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWSLLDNLEWSLGYSKRFGIVHV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCEEEE
DYETQVRTPKRSARFYSSVIRSNGGNLG
CCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8277941 [H]