Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is caiA [C]

Identifier: 103486364

GI number: 103486364

Start: 880918

End: 881808

Strand: Reverse

Name: caiA [C]

Synonym: Sala_0874

Alternate gene names: 103486364

Gene position: 881808-880918 (Counterclockwise)

Preceding gene: 103486365

Following gene: 103486362

Centisome position: 26.36

GC content: 65.88

Gene sequence:

>891_bases
ATGGACCTGACCCCGAACGACGACCAGATTGCCCTTGTTTCCGCCACCGCCGACTGGTGCCGCGATCATATGCCGCTCGA
AAACGCGCGCTCGCGCAGTCGCGATCTTTGGCCGCAGATCGACGCGATGGGCTGGGCCTCGATGACCGGCCCCGAAATGG
AGCTGGACCACGCGACCGAAGCGCTGGTCTTTGCCGAGTTGGGCCGCTTTCTAGCGCCGGTGGCGCTGCTGTCGAGCGCC
GTCGCCGCGCGCTGGGAACCCCGCCAGGTCAAAGTCGCGCTGGCCGTGACCGAGGGCAGGATGTTGCGGGTGCTGGACGG
CTCCGATGCGTCGGCCGCGCTGGGCGTTGTCGATCGTCGCGCAATGCTTTTCGATCTTCCAGCAGCGTTGAGCGCGCAGC
CTTCGCTCGACCCTACCGTAACGGTCGCCCGCTTCGACGAACCGCCTTCGGCTCATGCGCTTGCCGATGCCCGCGCTGCG
CTGCACCTCCAGCTTGTCGCCGCTGCGTTCGCGGTCGGCTGTGCCGACGCGGCGCGTGACATGGCCGCCGGATATGCCCT
GATACGCGAACAATTCGAGCGGCCGATCGGCTGGTTTCAGGCGATCAAACATATGTGCGCCGACATGGCCGTGCGCGCTG
CCGTCGCTCGTTCGCAGCTATATTATGCGGCGTGCGCACTCGATTCCAACGCCGATGAAGCGGCGTTTCATGTGGCGGCG
GCGAAGCGACTCGCCGACCAGGCCGCGCTGGAAAATAGCCGCGCCAACATTCAGGTGCACGGCGGGATCGGCATGACCGA
CGAAGCCTTGCCCCATCTGTGCCTGAAGCGCGCGCATCTGCTACAGTTCGTCATTCCGGCCGAGCGAAGCGCCTTATTGG
CCAGTGCCTGA

Upstream 100 bases:

>100_bases
CTGCGCGGCTTCGCGGCCACCATCGCCGGGGGCAGCGCCCAGATCCAGCGCGACATCATCGGCGAGCGGCTGCTCGGCCT
GCCCAAATCCCGGTGACACG

Downstream 100 bases:

>100_bases
GATGTCAGTTGTCGACGATCGCCTGAAACTCATCCTCCAGCCAGCGGCGCAGGTCGGGATCGACCGCGCCTGCAAACCCG
GCCAGCGGAAGCTGTTCGCG

Product: acyl-CoA dehydrogenase-like protein

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase-Like; Oxidoreductase; Acyl-CoA Dehydrogenase-Like Protein; Acyl-CoA Dehydrogenase Domain Protein

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATEALVFAELGRFLAPVALLSSA
VAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRRAMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAA
LHLQLVAAAFAVGCADAARDMAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA
AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA

Sequences:

>Translated_296_residues
MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATEALVFAELGRFLAPVALLSSA
VAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRRAMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAA
LHLQLVAAAFAVGCADAARDMAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA
AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA
>Mature_296_residues
MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATEALVFAELGRFLAPVALLSSA
VAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRRAMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAA
LHLQLVAAAFAVGCADAARDMAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA
AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA

Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.3

Molecular weight: Translated: 31728; Mature: 31728

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATE
CCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCHHHHHH
ALVFAELGRFLAPVALLSSAVAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHH
AMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAALHLQLVAAAFAVGCADAARD
HHHEECCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH
AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA
HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATE
CCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCHHHHHH
ALVFAELGRFLAPVALLSSAVAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHH
AMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAALHLQLVAAAFAVGCADAARD
HHHEECCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH
AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA
HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA