Definition Haemophilus parainfluenzae T3T1, complete genome.
Accession NC_015964
Length 2,086,875
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 47 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 403579..403624  attL    ATGGCAGGGGCGGAGAGGCTCGAACTCCCAACACCCGGTTTTGGAG  N/A  Click
2 complement(404123..405133)  PHAGE_Mannhe_phiMHaA1: capsid portal protein Q; PARA_03990; phage(gi109289937)  3e-119  Click
3 complement(405143..406918)  PHAGE_Mannhe_phiMHaA1: terminase ATPase subunit; PARA_04000; phage(gi109289938)  0.0  Click
4 407045..407908  PHAGE_Mannhe_phiMHaA1: capsid scaffolding protein O; PARA_04010; phage(gi109289939)  4e-66  Click
5 407930..408964  PHAGE_Burkho_phiE202: gp2, phage major capsid protein, P2 family; PARA_04020; phage(gi134288740)  9e-92  Click
6 408970..409620  PHAGE_Mannhe_phiMHaA1: terminase small subunit; PARA_04030; phage(gi109289941)  1e-47  Click
7 409742..410248  PHAGE_Mannhe_phiMHaA1: head completion protein L; PARA_04040; phage(gi109289942)  2e-33  Click
8 410248..410457  PHAGE_Mannhe_phiMHaA1: tail synthesis protein X; PARA_04050; phage(gi109289943)  4e-10  Click
9 410459..410686  PHAGE_Mannhe_phiMHaA1: possible holin; PARA_04060; phage(gi109289944)  7e-05  Click
10 410679..411197  PHAGE_Mannhe_phiMHaA1: endolysin; PARA_04070; phage(gi109289945)  7e-38  Click
11 411182..411532  hypothetical protein; PARA_04080  N/A  Click
12 411495..411710  hypothetical protein; PARA_04090  N/A  Click
13 411707..411922  PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p11; PARA_04100; phage(gi109289947)  4e-14  Click
14 411919..412401  PHAGE_Erwini_ENT90: phage tail completion protein; PARA_04110; phage(gi431810962)  1e-28  Click
15 412401..412859  PHAGE_Mannhe_phiMHaA1: tail synthesis protein S; PARA_04120; phage(gi109289949)  2e-27  Click
16 412879..415584  PHAGE_Mannhe_phiMHaA1: tail protein T; PARA_04025; phage(gi109289951)  3e-92  Click
17 415699..416292  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein V; PARA_04140; phage(gi109289954)  1e-55  Click
18 416292..416642  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein W; PARA_04150; phage(gi109289955)  2e-21  Click
19 416626..417540  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; PARA_04160; phage(gi109289956)  5e-101  Click
20 417530..418066  PHAGE_Mannhe_phiMHaA1: tail formation protein I; PARA_04170; phage(gi109289957)  9e-52  Click
21 418075..419997  PHAGE_Mannhe_phiMHaA1: variable tail fiber protein H; PARA_04180; phage(gi109289958)  3e-40  Click
22 420016..420600  PHAGE_Haemop_HP2: tail collar; PARA_04190; phage(gi17981848)  2e-15  Click
23 420585..420857  PHAGE_Aggreg_S1249: hypothetical protein; PARA_04200; phage(gi273809543)  2e-29  Click
24 420975..422159  PROPHAGE_Salmon_Ty2: major tail sheath protein; PARA_04210; phage(gi29143758)  4e-104  Click
25 422163..422669  PHAGE_Mannhe_phiMHaA1: tail tube protein FII; PARA_04220; phage(gi109289961)  4e-56  Click
26 422748..423041  PHAGE_Burkho_KS5: gp16; PARA_04230; phage(gi327198014)  4e-16  Click
27 423041..423187  PHAGE_Burkho_KS5: gp17; PARA_04240; phage(gi327198015)  7e-10  Click
28 423168..423293  hypothetical protein; PARA_04250  N/A  Click
29 423517..423954  PHAGE_Mannhe_phiMHaA1: tail protein U; PARA_04260; phage(gi109289964)  2e-41  Click
30 423954..425147  PHAGE_Mannhe_phiMHaA1: tail protein D; PARA_04270; phage(gi109289965)  4e-104  Click
31 complement(425175..425567)  hypothetical protein; PARA_04280  N/A  Click
32 complement(425555..426256)  PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p34; PARA_04290; phage(gi109289969)  3e-14  Click
33 complement(426266..426940)  PHAGE_Mannhe_phiMHaA1: CI repressor; PARA_04300; phage(gi109289970)  1e-46  Click
34 427060..427272  PHAGE_Salmon_ST160: Cro; PARA_04310; phage(gi318065926)  5e-13  Click
35 complement(427308..427730)  hypothetical protein; PARA_04320  N/A  Click
36 427982..428137  hypothetical protein; PARA_04330  N/A  Click
37 428309..428425  hypothetical protein; PARA_04340  N/A  Click
38 428570..428779  hypothetical protein; PARA_04350  N/A  Click
39 428795..429154  PHAGE_Haemop_HP1: hypothetical protein HP1p09; PARA_04360; phage(gi9628609)  3e-15  Click
40 429163..429417  hypothetical protein; PARA_04370  N/A  Click
41 429414..429662  hypothetical protein; PARA_04380  N/A  Click
42 429655..429768  hypothetical protein; PARA_04390  N/A  Click
43 429781..430089  hypothetical protein; PARA_04400  N/A  Click
44 430097..432295  PHAGE_Mannhe_phiMHaA1: replication protein A; PARA_04410; phage(gi109289978)  5e-89  Click
45 432430..432549  hypothetical protein; PARA_04420  N/A  Click
46 432562..433077  PHAGE_Haemop_HP1: putative DNA binding protein; PARA_04430; phage(gi9628616)  5e-29  Click
47 433197..433406  hypothetical protein; PARA_04440  N/A  Click
48 433457..434371  PHAGE_Entero_mEpX2: integrase; putative; phage integrase; PARA_04450(gi428765639)  7e-45  Click
49 434388..434433  attR    ATGGCAGGGGCGGAGAGGCTCGAACTCCCAACACCCGGTTTTGGAG  N/A  Click